Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 AC073413.1-201ENST00000603927 732 ntBASIC14.05□□□□□ -0.16
HMGCS1Q01581 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 AL022328.1-201ENST00000610050 478 ntBASIC14.05□□□□□ -0.16
HMGCS1Q01581 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 AC063926.2-201ENST00000623766 1308 ntBASIC14.05□□□□□ -0.16
HMGCS1Q01581 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HMGCS1Q01581 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 AC023794.5-201ENST00000564380 2157 ntBASIC14.05□□□□□ -0.16
HMGCS1Q01581 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.05□□□□□ -0.16
HMGCS1Q01581 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 AGAP10P-201ENST00000454844 2418 ntBASIC14.04□□□□□ -0.16
HMGCS1Q01581 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 AC016694.1-201ENST00000434179 700 ntBASIC14.04□□□□□ -0.16
HMGCS1Q01581 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 TMEM198B-204ENST00000484016 896 ntBASIC14.04□□□□□ -0.16
HMGCS1Q01581 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 COX5BP1-201ENST00000507622 393 ntBASIC14.04□□□□□ -0.16
HMGCS1Q01581 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 AC027237.1-201ENST00000560942 655 ntBASIC14.04□□□□□ -0.16
HMGCS1Q01581 BTNL10-201ENST00000595971 695 ntBASIC14.04□□□□□ -0.16
HMGCS1Q01581 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 AC064801.2-201ENST00000625052 1303 ntBASIC14.04□□□□□ -0.16
HMGCS1Q01581 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
HMGCS1Q01581 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.04□□□□□ -0.16
HMGCS1Q01581 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 CD8B2-202ENST00000417670 633 ntBASIC14.03□□□□□ -0.16
HMGCS1Q01581 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 CICP12-201ENST00000455801 843 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms