Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SEC61A1P61619 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.85□□□□□ -0.35
SEC61A1P61619 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SEC61A1P61619 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SEC61A1P61619 AL731571.1-201ENST00000617058 5428 ntBASIC12.85□□□□□ -0.35
SEC61A1P61619 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.85□□□□□ -0.35
SEC61A1P61619 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
SEC61A1P61619 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SEC61A1P61619 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SEC61A1P61619 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
SEC61A1P61619 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.84□□□□□ -0.35
SEC61A1P61619 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SEC61A1P61619 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SEC61A1P61619 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SEC61A1P61619 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.84□□□□□ -0.35
SEC61A1P61619 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SEC61A1P61619 ANKRD19P-201ENST00000338192 862 ntBASIC12.84□□□□□ -0.35
SEC61A1P61619 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
SEC61A1P61619 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.84□□□□□ -0.35
SEC61A1P61619 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.84□□□□□ -0.35
SEC61A1P61619 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SEC61A1P61619 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.84□□□□□ -0.35
SEC61A1P61619 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.84□□□□□ -0.35
SEC61A1P61619 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.84□□□□□ -0.35
SEC61A1P61619 AC022210.1-201ENST00000449856 793 ntBASIC12.84□□□□□ -0.35
SEC61A1P61619 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.84□□□□□ -0.35
SEC61A1P61619 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.84□□□□□ -0.35
SEC61A1P61619 AC106760.1-201ENST00000508690 800 ntBASIC12.84□□□□□ -0.35
SEC61A1P61619 AP001889.1-201ENST00000525414 633 ntBASIC12.84□□□□□ -0.35
SEC61A1P61619 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.84□□□□□ -0.35
SEC61A1P61619 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.84□□□□□ -0.35
SEC61A1P61619 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SEC61A1P61619 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.84□□□□□ -0.35
SEC61A1P61619 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.84□□□□□ -0.35
SEC61A1P61619 MIR4259-201ENST00000584466 101 ntBASIC12.84□□□□□ -0.35
SEC61A1P61619 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SEC61A1P61619 AL359881.2-201ENST00000602973 570 ntBASIC12.84□□□□□ -0.35
SEC61A1P61619 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SEC61A1P61619 MIR6775-201ENST00000617557 69 ntBASIC12.84□□□□□ -0.35
SEC61A1P61619 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.84□□□□□ -0.35
SEC61A1P61619 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.84□□□□□ -0.35
SEC61A1P61619 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.84□□□□□ -0.35
SEC61A1P61619 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.84□□□□□ -0.35
SEC61A1P61619 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 KRT8P24-201ENST00000560290 1559 ntBASIC12.84□□□□□ -0.35
SEC61A1P61619 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.84□□□□□ -0.35
SEC61A1P61619 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SEC61A1P61619 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.84□□□□□ -0.35
SEC61A1P61619 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.84□□□□□ -0.35
SEC61A1P61619 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.84□□□□□ -0.35
SEC61A1P61619 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SEC61A1P61619 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SEC61A1P61619 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SEC61A1P61619 AC020658.7-201ENST00000624274 2442 ntBASIC12.83□□□□□ -0.35
SEC61A1P61619 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
SEC61A1P61619 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SEC61A1P61619 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SEC61A1P61619 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.83□□□□□ -0.35
SEC61A1P61619 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.83□□□□□ -0.36
SEC61A1P61619 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.83□□□□□ -0.36
SEC61A1P61619 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SEC61A1P61619 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.83□□□□□ -0.36
SEC61A1P61619 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.83□□□□□ -0.36
SEC61A1P61619 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
SEC61A1P61619 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SEC61A1P61619 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms