Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
VCPP55072 AC025271.4-201ENST00000621477 1726 ntBASIC15.61■□□□□ 0.09
VCPP55072 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.61■□□□□ 0.09
VCPP55072 AL354877.1-201ENST00000424412 413 ntBASIC15.61■□□□□ 0.09
VCPP55072 AC078991.1-201ENST00000437297 610 ntBASIC15.61■□□□□ 0.09
VCPP55072 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.61■□□□□ 0.09
VCPP55072 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.61■□□□□ 0.09
VCPP55072 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 AC021723.1-201ENST00000486306 515 ntBASIC15.61■□□□□ 0.09
VCPP55072 AC106794.1-201ENST00000506935 792 ntBASIC15.61■□□□□ 0.09
VCPP55072 AL391280.1-201ENST00000506969 1062 ntBASIC15.61■□□□□ 0.09
VCPP55072 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.61■□□□□ 0.09
VCPP55072 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.61■□□□□ 0.09
VCPP55072 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 AP003171.2-201ENST00000528208 925 ntBASIC15.61■□□□□ 0.09
VCPP55072 RTN3P1-201ENST00000536295 711 ntBASIC15.61■□□□□ 0.09
VCPP55072 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
VCPP55072 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.61■□□□□ 0.09
VCPP55072 AC006453.1-201ENST00000636037 1257 ntBASIC15.61■□□□□ 0.09
VCPP55072 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 AL354702.1-201ENST00000442006 1960 ntBASIC15.61■□□□□ 0.09
VCPP55072 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
VCPP55072 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
VCPP55072 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.61■□□□□ 0.09
VCPP55072 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.61■□□□□ 0.09
VCPP55072 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VCPP55072 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.61■□□□□ 0.09
VCPP55072 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.6■□□□□ 0.09
VCPP55072 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
VCPP55072 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
VCPP55072 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
VCPP55072 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.6■□□□□ 0.09
VCPP55072 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
VCPP55072 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.6■□□□□ 0.09
VCPP55072 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.6■□□□□ 0.09
VCPP55072 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.6■□□□□ 0.09
VCPP55072 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
VCPP55072 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
VCPP55072 HIST2H2BB-201ENST00000449108 381 ntBASIC15.6■□□□□ 0.09
VCPP55072 RNMTL1P1-201ENST00000454103 560 ntBASIC15.6■□□□□ 0.09
VCPP55072 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.6■□□□□ 0.09
VCPP55072 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.6■□□□□ 0.09
VCPP55072 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.6■□□□□ 0.09
VCPP55072 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.6■□□□□ 0.09
VCPP55072 RN7SL713P-201ENST00000582127 302 ntBASIC15.6■□□□□ 0.09
VCPP55072 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.6■□□□□ 0.09
VCPP55072 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.6■□□□□ 0.09
VCPP55072 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
VCPP55072 CLUHP2-201ENST00000426660 1303 ntBASIC15.6■□□□□ 0.09
VCPP55072 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.6■□□□□ 0.09
VCPP55072 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 SBF1P1-201ENST00000444527 5631 ntBASIC15.6■□□□□ 0.09
VCPP55072 KRT8P29-201ENST00000420409 1371 ntBASIC15.6■□□□□ 0.09
VCPP55072 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.6■□□□□ 0.09
VCPP55072 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.6■□□□□ 0.09
VCPP55072 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
VCPP55072 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
VCPP55072 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.6■□□□□ 0.09
VCPP55072 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.59■□□□□ 0.09
VCPP55072 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.59■□□□□ 0.09
VCPP55072 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.59■□□□□ 0.09
VCPP55072 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
VCPP55072 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.59■□□□□ 0.09
VCPP55072 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
VCPP55072 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms