Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PSMD4P55036 AC010141.1-201ENST00000411585 623 ntBASIC13.6□□□□□ -0.23
PSMD4P55036 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
PSMD4P55036 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.6□□□□□ -0.23
PSMD4P55036 ATP5G2P4-201ENST00000442175 420 ntBASIC13.6□□□□□ -0.23
PSMD4P55036 CHMP1AP1-201ENST00000445563 662 ntBASIC13.6□□□□□ -0.23
PSMD4P55036 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.6□□□□□ -0.23
PSMD4P55036 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.6□□□□□ -0.23
PSMD4P55036 AP006547.1-201ENST00000563435 692 ntBASIC13.6□□□□□ -0.23
PSMD4P55036 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.6□□□□□ -0.23
PSMD4P55036 AL358472.3-201ENST00000608147 415 ntBASIC13.6□□□□□ -0.23
PSMD4P55036 AC244157.2-201ENST00000616239 1006 ntBASIC13.6□□□□□ -0.23
PSMD4P55036 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.6□□□□□ -0.23
PSMD4P55036 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.6□□□□□ -0.23
PSMD4P55036 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.6□□□□□ -0.23
PSMD4P55036 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.6□□□□□ -0.23
PSMD4P55036 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 FP325330.2-201ENST00000624219 5630 ntBASIC13.6□□□□□ -0.23
PSMD4P55036 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
PSMD4P55036 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.6□□□□□ -0.23
PSMD4P55036 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PSMD4P55036 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
PSMD4P55036 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.59□□□□□ -0.23
PSMD4P55036 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PSMD4P55036 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PSMD4P55036 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.59□□□□□ -0.23
PSMD4P55036 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PSMD4P55036 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PSMD4P55036 RN7SL832P-201ENST00000607781 1756 ntBASIC13.59□□□□□ -0.23
PSMD4P55036 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 MIR658-201ENST00000385210 100 ntBASIC13.59□□□□□ -0.23
PSMD4P55036 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
PSMD4P55036 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.59□□□□□ -0.23
PSMD4P55036 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.59□□□□□ -0.23
PSMD4P55036 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 FAM58BP-201ENST00000439056 645 ntBASIC13.59□□□□□ -0.23
PSMD4P55036 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.59□□□□□ -0.23
PSMD4P55036 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PSMD4P55036 AC010328.2-201ENST00000597698 1111 ntBASIC13.59□□□□□ -0.23
PSMD4P55036 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PSMD4P55036 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.59□□□□□ -0.23
PSMD4P55036 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 AC215219.1-201ENST00000400706 1817 ntBASIC13.59□□□□□ -0.23
PSMD4P55036 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.59□□□□□ -0.23
PSMD4P55036 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
PSMD4P55036 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.59□□□□□ -0.23
PSMD4P55036 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 AL023775.1-201ENST00000454907 1746 ntBASIC13.59□□□□□ -0.23
PSMD4P55036 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PSMD4P55036 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
PSMD4P55036 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PSMD4P55036 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PSMD4P55036 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.58□□□□□ -0.23
PSMD4P55036 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.58□□□□□ -0.24
PSMD4P55036 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.58□□□□□ -0.24
PSMD4P55036 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.58□□□□□ -0.24
PSMD4P55036 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 ANKRD19P-201ENST00000338192 862 ntBASIC13.58□□□□□ -0.24
PSMD4P55036 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
PSMD4P55036 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.58□□□□□ -0.24
PSMD4P55036 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms