Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 PSME2P2-201ENST00000453033 700 ntBASIC15.69■□□□□ 0.1
BRCA2P51587 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC15.69■□□□□ 0.1
BRCA2P51587 RN7SL480P-201ENST00000581481 294 ntBASIC15.69■□□□□ 0.1
BRCA2P51587 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC15.69■□□□□ 0.1
BRCA2P51587 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
BRCA2P51587 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCA2P51587 AC092115.1-201ENST00000566277 1402 ntBASIC15.68■□□□□ 0.1
BRCA2P51587 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
BRCA2P51587 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.68■□□□□ 0.1
BRCA2P51587 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
BRCA2P51587 AL121753.2-201ENST00000624581 1461 ntBASIC15.68■□□□□ 0.1
BRCA2P51587 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.68■□□□□ 0.1
BRCA2P51587 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.68■□□□□ 0.1
BRCA2P51587 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
BRCA2P51587 MIR339-201ENST00000362153 94 ntBASIC15.68■□□□□ 0.1
BRCA2P51587 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
BRCA2P51587 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 FAM86JP-202ENST00000484500 988 ntBASIC15.68■□□□□ 0.1
BRCA2P51587 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC15.68■□□□□ 0.1
BRCA2P51587 CDC37P2-201ENST00000562287 1029 ntBASIC15.68■□□□□ 0.1
BRCA2P51587 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
BRCA2P51587 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC15.68■□□□□ 0.1
BRCA2P51587 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.68■□□□□ 0.1
BRCA2P51587 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
BRCA2P51587 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
BRCA2P51587 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC15.68■□□□□ 0.1
BRCA2P51587 YY1P2-201ENST00000438766 948 ntBASIC15.68■□□□□ 0.1
BRCA2P51587 UGT1A12P-201ENST00000447084 853 ntBASIC15.68■□□□□ 0.1
BRCA2P51587 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.68■□□□□ 0.1
BRCA2P51587 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.68■□□□□ 0.1
BRCA2P51587 ABCC6P2-201ENST00000526069 590 ntBASIC15.68■□□□□ 0.1
BRCA2P51587 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC15.68■□□□□ 0.1
BRCA2P51587 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC15.68■□□□□ 0.1
BRCA2P51587 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
BRCA2P51587 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC15.68■□□□□ 0.1
BRCA2P51587 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC15.68■□□□□ 0.1
BRCA2P51587 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.68■□□□□ 0.1
BRCA2P51587 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 KRT8P38-201ENST00000441370 1430 ntBASIC15.68■□□□□ 0.1
BRCA2P51587 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
BRCA2P51587 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
BRCA2P51587 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
BRCA2P51587 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
BRCA2P51587 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
BRCA2P51587 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC15.68■□□□□ 0.1
BRCA2P51587 SNRPCP15-201ENST00000424055 192 ntBASIC15.68■□□□□ 0.1
BRCA2P51587 MST1L-204ENST00000545160 559 ntTSL 4 BASIC15.68■□□□□ 0.1
BRCA2P51587 Z82244.2-201ENST00000632196 448 ntBASIC15.68■□□□□ 0.1
BRCA2P51587 CCT8L1P-201ENST00000465400 1674 ntBASIC15.68■□□□□ 0.1
BRCA2P51587 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCA2P51587 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 GH1-203ENST00000351388 685 ntTSL 2 BASIC15.67■□□□□ 0.1
BRCA2P51587 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 WDR54-202ENST00000409791 854 ntTSL 3 BASIC15.67■□□□□ 0.1
BRCA2P51587 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC15.67■□□□□ 0.1
BRCA2P51587 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
BRCA2P51587 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
BRCA2P51587 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.67■□□□□ 0.1
BRCA2P51587 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
BRCA2P51587 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.67■□□□□ 0.1
BRCA2P51587 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC15.67■□□□□ 0.1
BRCA2P51587 FTH1P18-201ENST00000412071 549 ntBASIC15.67■□□□□ 0.1
BRCA2P51587 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC15.67■□□□□ 0.1
BRCA2P51587 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC15.67■□□□□ 0.1
BRCA2P51587 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms