Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TM4SF4P48230 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.1■□□□□ 0.17
TM4SF4P48230 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM4SF4P48230 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM4SF4P48230 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.09■□□□□ 0.17
TM4SF4P48230 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM4SF4P48230 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TM4SF4P48230 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM4SF4P48230 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.09■□□□□ 0.17
TM4SF4P48230 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TM4SF4P48230 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.09■□□□□ 0.17
TM4SF4P48230 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM4SF4P48230 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
TM4SF4P48230 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.09■□□□□ 0.17
TM4SF4P48230 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TM4SF4P48230 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM4SF4P48230 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM4SF4P48230 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TM4SF4P48230 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM4SF4P48230 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM4SF4P48230 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TM4SF4P48230 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM4SF4P48230 U73169.1-201ENST00000395152 367 ntBASIC16.09■□□□□ 0.17
TM4SF4P48230 MIR1307-201ENST00000408840 149 ntBASIC16.09■□□□□ 0.17
TM4SF4P48230 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM4SF4P48230 KRT18P15-201ENST00000458108 1291 ntBASIC16.09■□□□□ 0.17
TM4SF4P48230 B9D1-206ENST00000461069 923 ntTSL 2 BASIC16.09■□□□□ 0.17
TM4SF4P48230 RN7SL838P-201ENST00000481676 295 ntBASIC16.09■□□□□ 0.17
TM4SF4P48230 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC16.09■□□□□ 0.17
TM4SF4P48230 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC16.09■□□□□ 0.17
TM4SF4P48230 AC084262.1-201ENST00000567818 751 ntBASIC16.09■□□□□ 0.17
TM4SF4P48230 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC16.09■□□□□ 0.17
TM4SF4P48230 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC16.09■□□□□ 0.17
TM4SF4P48230 NF1P11-201ENST00000621292 1282 ntBASIC16.09■□□□□ 0.17
TM4SF4P48230 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.09■□□□□ 0.17
TM4SF4P48230 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM4SF4P48230 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC16.09■□□□□ 0.17
TM4SF4P48230 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.09■□□□□ 0.17
TM4SF4P48230 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM4SF4P48230 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.09■□□□□ 0.17
TM4SF4P48230 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TM4SF4P48230 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.09■□□□□ 0.17
TM4SF4P48230 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM4SF4P48230 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.09■□□□□ 0.17
TM4SF4P48230 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM4SF4P48230 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.09■□□□□ 0.17
TM4SF4P48230 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TM4SF4P48230 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TM4SF4P48230 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.08■□□□□ 0.17
TM4SF4P48230 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TM4SF4P48230 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TM4SF4P48230 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TM4SF4P48230 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TM4SF4P48230 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM4SF4P48230 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM4SF4P48230 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TM4SF4P48230 MIR632-201ENST00000385193 94 ntBASIC16.08■□□□□ 0.16
TM4SF4P48230 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM4SF4P48230 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC16.08■□□□□ 0.16
TM4SF4P48230 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.08■□□□□ 0.16
TM4SF4P48230 AC112250.1-201ENST00000504640 745 ntBASIC16.08■□□□□ 0.16
TM4SF4P48230 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.08■□□□□ 0.16
TM4SF4P48230 AC106782.5-201ENST00000616011 337 ntBASIC16.08■□□□□ 0.16
TM4SF4P48230 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TM4SF4P48230 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.08■□□□□ 0.16
TM4SF4P48230 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TM4SF4P48230 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM4SF4P48230 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM4SF4P48230 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TM4SF4P48230 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM4SF4P48230 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.08■□□□□ 0.16
TM4SF4P48230 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TM4SF4P48230 AC008620.2-201ENST00000510294 1569 ntBASIC16.08■□□□□ 0.16
TM4SF4P48230 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.08■□□□□ 0.16
TM4SF4P48230 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TM4SF4P48230 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.07■□□□□ 0.16
TM4SF4P48230 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.07■□□□□ 0.16
TM4SF4P48230 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TM4SF4P48230 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TM4SF4P48230 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TM4SF4P48230 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.07■□□□□ 0.16
TM4SF4P48230 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TM4SF4P48230 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.07■□□□□ 0.16
TM4SF4P48230 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TM4SF4P48230 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC16.07■□□□□ 0.16
TM4SF4P48230 MARK2P17-201ENST00000498560 841 ntBASIC16.07■□□□□ 0.16
TM4SF4P48230 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC16.07■□□□□ 0.16
TM4SF4P48230 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC16.07■□□□□ 0.16
TM4SF4P48230 AC023051.2-201ENST00000541141 460 ntBASIC16.07■□□□□ 0.16
TM4SF4P48230 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC16.07■□□□□ 0.16
TM4SF4P48230 RN7SL478P-201ENST00000584358 298 ntBASIC16.07■□□□□ 0.16
TM4SF4P48230 CLPP-205ENST00000596605 646 ntTSL 2 BASIC16.07■□□□□ 0.16
TM4SF4P48230 MIR6074-201ENST00000612054 107 ntBASIC16.07■□□□□ 0.16
TM4SF4P48230 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms