Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC17.67■□□□□ 0.42
PDE6BP35913 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PDE6BP35913 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
PDE6BP35913 MIR4265-201ENST00000582152 99 ntBASIC17.67■□□□□ 0.42
PDE6BP35913 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.67■□□□□ 0.42
PDE6BP35913 AL009176.1-201ENST00000607876 650 ntBASIC17.67■□□□□ 0.42
PDE6BP35913 MME-218ENST00000625667 363 ntTSL 5 BASIC17.67■□□□□ 0.42
PDE6BP35913 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC17.67■□□□□ 0.42
PDE6BP35913 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6BP35913 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.67■□□□□ 0.42
PDE6BP35913 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PDE6BP35913 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6BP35913 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6BP35913 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.67■□□□□ 0.42
PDE6BP35913 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.67■□□□□ 0.42
PDE6BP35913 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.67■□□□□ 0.42
PDE6BP35913 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.67■□□□□ 0.42
PDE6BP35913 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDE6BP35913 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6BP35913 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PDE6BP35913 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PDE6BP35913 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.66■□□□□ 0.42
PDE6BP35913 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PDE6BP35913 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6BP35913 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
PDE6BP35913 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PDE6BP35913 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC17.66■□□□□ 0.42
PDE6BP35913 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6BP35913 ASS1P2-201ENST00000439895 1223 ntBASIC17.66■□□□□ 0.42
PDE6BP35913 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.66■□□□□ 0.42
PDE6BP35913 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6BP35913 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.66■□□□□ 0.42
PDE6BP35913 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6BP35913 PRSS3P1-201ENST00000503996 742 ntBASIC17.66■□□□□ 0.42
PDE6BP35913 AC027139.1-201ENST00000565286 951 ntBASIC17.66■□□□□ 0.42
PDE6BP35913 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 NT5C-204ENST00000578337 582 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6BP35913 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC17.66■□□□□ 0.42
PDE6BP35913 AL160191.2-201ENST00000603975 601 ntBASIC17.66■□□□□ 0.42
PDE6BP35913 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC17.66■□□□□ 0.42
PDE6BP35913 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PDE6BP35913 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.66■□□□□ 0.42
PDE6BP35913 AC023824.1-201ENST00000562945 2975 ntBASIC17.66■□□□□ 0.42
PDE6BP35913 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDE6BP35913 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PDE6BP35913 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PDE6BP35913 KRT8P18-201ENST00000413425 1445 ntBASIC17.65■□□□□ 0.42
PDE6BP35913 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC17.65■□□□□ 0.42
PDE6BP35913 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.65■□□□□ 0.42
PDE6BP35913 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.65■□□□□ 0.42
PDE6BP35913 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PDE6BP35913 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PDE6BP35913 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC17.65■□□□□ 0.42
PDE6BP35913 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PDE6BP35913 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC17.65■□□□□ 0.42
PDE6BP35913 RN7SKP155-201ENST00000516031 288 ntBASIC17.65■□□□□ 0.42
PDE6BP35913 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.65■□□□□ 0.42
PDE6BP35913 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC17.65■□□□□ 0.42
PDE6BP35913 CASP16P-204ENST00000635032 809 ntBASIC17.65■□□□□ 0.42
PDE6BP35913 AP000769.1-203ENST00000637245 208 ntBASIC17.65■□□□□ 0.42
PDE6BP35913 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.65■□□□□ 0.42
PDE6BP35913 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.65■□□□□ 0.42
PDE6BP35913 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms