Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SHC1P29353 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.4□□□□□ -0.26
SHC1P29353 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.4□□□□□ -0.26
SHC1P29353 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.4□□□□□ -0.27
SHC1P29353 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SHC1P29353 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
SHC1P29353 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SHC1P29353 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.39□□□□□ -0.27
SHC1P29353 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
SHC1P29353 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
SHC1P29353 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SHC1P29353 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.39□□□□□ -0.27
SHC1P29353 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.39□□□□□ -0.27
SHC1P29353 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.39□□□□□ -0.27
SHC1P29353 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.39□□□□□ -0.27
SHC1P29353 RPS2P32-201ENST00000439199 892 ntBASIC13.39□□□□□ -0.27
SHC1P29353 CHMP1AP1-201ENST00000445563 662 ntBASIC13.39□□□□□ -0.27
SHC1P29353 HOMER2P2-201ENST00000451621 847 ntBASIC13.39□□□□□ -0.27
SHC1P29353 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.39□□□□□ -0.27
SHC1P29353 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.39□□□□□ -0.27
SHC1P29353 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.39□□□□□ -0.27
SHC1P29353 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.39□□□□□ -0.27
SHC1P29353 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.39□□□□□ -0.27
SHC1P29353 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
SHC1P29353 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.39□□□□□ -0.27
SHC1P29353 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SHC1P29353 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.39□□□□□ -0.27
SHC1P29353 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.39□□□□□ -0.27
SHC1P29353 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SHC1P29353 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.39□□□□□ -0.27
SHC1P29353 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SHC1P29353 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.39□□□□□ -0.27
SHC1P29353 AL023775.1-201ENST00000454907 1746 ntBASIC13.39□□□□□ -0.27
SHC1P29353 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SHC1P29353 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.39□□□□□ -0.27
SHC1P29353 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
SHC1P29353 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SHC1P29353 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SHC1P29353 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
SHC1P29353 AL136172.1-201ENST00000598590 1394 ntBASIC13.38□□□□□ -0.27
SHC1P29353 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 FAM21FP-201ENST00000426241 1131 ntBASIC13.38□□□□□ -0.27
SHC1P29353 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.38□□□□□ -0.27
SHC1P29353 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SHC1P29353 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
SHC1P29353 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.38□□□□□ -0.27
SHC1P29353 AL583810.1-201ENST00000553344 1045 ntBASIC13.38□□□□□ -0.27
SHC1P29353 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.38□□□□□ -0.27
SHC1P29353 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.38□□□□□ -0.27
SHC1P29353 DUX4L45-201ENST00000566406 1057 ntBASIC13.38□□□□□ -0.27
SHC1P29353 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.38□□□□□ -0.27
SHC1P29353 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SHC1P29353 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.38□□□□□ -0.27
SHC1P29353 ZACNP1-201ENST00000612259 710 ntBASIC13.38□□□□□ -0.27
SHC1P29353 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.38□□□□□ -0.27
SHC1P29353 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.38□□□□□ -0.27
SHC1P29353 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SHC1P29353 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms