Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 CHMP1AP1-201ENST00000445563 662 ntBASIC14.37□□□□□ -0.11
CDH3P22223 AL591846.1-201ENST00000451736 433 ntBASIC14.37□□□□□ -0.11
CDH3P22223 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH3P22223 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CDH3P22223 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.37□□□□□ -0.11
CDH3P22223 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.37□□□□□ -0.11
CDH3P22223 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH3P22223 AL022328.3-201ENST00000607943 679 ntBASIC14.37□□□□□ -0.11
CDH3P22223 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.37□□□□□ -0.11
CDH3P22223 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CDH3P22223 AL096828.3-201ENST00000615354 462 ntBASIC14.37□□□□□ -0.11
CDH3P22223 AP001002.3-201ENST00000623482 206 ntBASIC14.37□□□□□ -0.11
CDH3P22223 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.37□□□□□ -0.11
CDH3P22223 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH3P22223 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH3P22223 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH3P22223 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CDH3P22223 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDH3P22223 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH3P22223 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDH3P22223 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH3P22223 AL138725.1-201ENST00000407347 1314 ntBASIC14.37□□□□□ -0.11
CDH3P22223 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH3P22223 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH3P22223 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDH3P22223 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDH3P22223 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 ACE3P-201ENST00000423435 1973 ntBASIC14.36□□□□□ -0.11
CDH3P22223 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH3P22223 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDH3P22223 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH3P22223 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH3P22223 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDH3P22223 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH3P22223 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.36□□□□□ -0.11
CDH3P22223 HSPB1P2-201ENST00000448722 546 ntBASIC14.36□□□□□ -0.11
CDH3P22223 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH3P22223 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH3P22223 AL136301.1-201ENST00000615830 422 ntBASIC14.36□□□□□ -0.11
CDH3P22223 GPR182-203ENST00000622922 591 ntBASIC14.36□□□□□ -0.11
CDH3P22223 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH3P22223 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH3P22223 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH3P22223 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH3P22223 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 AC003102.2-201ENST00000589195 1469 ntBASIC14.36□□□□□ -0.11
CDH3P22223 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH3P22223 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CDH3P22223 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH3P22223 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH3P22223 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH3P22223 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH3P22223 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH3P22223 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDH3P22223 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH3P22223 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH3P22223 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH3P22223 AC009093.2-202ENST00000620513 2079 ntBASIC14.35□□□□□ -0.11
CDH3P22223 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH3P22223 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH3P22223 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH3P22223 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH3P22223 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH3P22223 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH3P22223 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CDH3P22223 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH3P22223 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH3P22223 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDH3P22223 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH3P22223 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH3P22223 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CDH3P22223 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDH3P22223 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH3P22223 RN7SKP230-201ENST00000365642 335 ntBASIC14.35□□□□□ -0.11
CDH3P22223 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDH3P22223 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH3P22223 AC100850.1-201ENST00000506768 649 ntBASIC14.35□□□□□ -0.11
CDH3P22223 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH3P22223 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH3P22223 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH3P22223 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.35□□□□□ -0.11
CDH3P22223 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH3P22223 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH3P22223 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.35□□□□□ -0.11
CDH3P22223 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.35□□□□□ -0.11
CDH3P22223 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 206.6 ms