Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
P04436 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
P04436 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.28□□□□□ -0.28
P04436 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.28□□□□□ -0.28
P04436 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P04436 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.28□□□□□ -0.28
P04436 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
P04436 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04436 TNRC18P2-201ENST00000417666 2714 ntBASIC13.27□□□□□ -0.28
P04436 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
P04436 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.27□□□□□ -0.28
P04436 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
P04436 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04436 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.27□□□□□ -0.28
P04436 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04436 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04436 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04436 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04436 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
P04436 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
P04436 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
P04436 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.27□□□□□ -0.29
P04436 AL596276.2-201ENST00000447525 331 ntBASIC13.27□□□□□ -0.29
P04436 UPF3AP2-201ENST00000457924 1132 ntBASIC13.27□□□□□ -0.29
P04436 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.27□□□□□ -0.29
P04436 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.27□□□□□ -0.29
P04436 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.27□□□□□ -0.29
P04436 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.27□□□□□ -0.29
P04436 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.27□□□□□ -0.29
P04436 AC003686.1-201ENST00000550956 1034 ntBASIC13.27□□□□□ -0.29
P04436 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.27□□□□□ -0.29
P04436 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.27□□□□□ -0.29
P04436 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.27□□□□□ -0.29
P04436 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.27□□□□□ -0.29
P04436 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
P04436 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.27□□□□□ -0.29
P04436 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
P04436 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.27□□□□□ -0.29
P04436 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
P04436 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.27□□□□□ -0.29
P04436 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
P04436 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
P04436 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.27□□□□□ -0.29
P04436 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
P04436 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.27□□□□□ -0.29
P04436 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
P04436 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.27□□□□□ -0.29
P04436 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P04436 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04436 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
P04436 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04436 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04436 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04436 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
P04436 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04436 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
P04436 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04436 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04436 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04436 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04436 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04436 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04436 AC215219.1-201ENST00000400706 1817 ntBASIC13.26□□□□□ -0.29
P04436 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04436 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P04436 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.26□□□□□ -0.29
P04436 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
P04436 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.26□□□□□ -0.29
P04436 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.26□□□□□ -0.29
P04436 TSPY25P-201ENST00000429463 745 ntBASIC13.26□□□□□ -0.29
P04436 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.26□□□□□ -0.29
P04436 FRMPD2B-201ENST00000431305 1347 ntBASIC13.26□□□□□ -0.29
P04436 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.26□□□□□ -0.29
P04436 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
P04436 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms