Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLDN11O75508 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
CLDN11O75508 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CLDN11O75508 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLDN11O75508 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN11O75508 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.78□□□□□ -0.04
CLDN11O75508 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CLDN11O75508 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN11O75508 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN11O75508 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLDN11O75508 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.78□□□□□ -0.04
CLDN11O75508 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDN11O75508 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLDN11O75508 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CLDN11O75508 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN11O75508 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
CLDN11O75508 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDN11O75508 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.78□□□□□ -0.04
CLDN11O75508 RN7SL530P-201ENST00000485097 298 ntBASIC14.78□□□□□ -0.04
CLDN11O75508 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN11O75508 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CLDN11O75508 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.78□□□□□ -0.04
CLDN11O75508 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
CLDN11O75508 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN11O75508 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CLDN11O75508 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN11O75508 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLDN11O75508 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN11O75508 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLDN11O75508 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CLDN11O75508 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.78□□□□□ -0.04
CLDN11O75508 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN11O75508 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN11O75508 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.77□□□□□ -0.04
CLDN11O75508 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.77□□□□□ -0.04
CLDN11O75508 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.77□□□□□ -0.04
CLDN11O75508 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN11O75508 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN11O75508 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.77□□□□□ -0.04
CLDN11O75508 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN11O75508 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CLDN11O75508 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN11O75508 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN11O75508 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN11O75508 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN11O75508 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN11O75508 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CLDN11O75508 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.77□□□□□ -0.04
CLDN11O75508 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN11O75508 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN11O75508 AL353637.1-201ENST00000451571 732 ntBASIC14.77□□□□□ -0.05
CLDN11O75508 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.77□□□□□ -0.05
CLDN11O75508 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.77□□□□□ -0.05
CLDN11O75508 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN11O75508 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN11O75508 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN11O75508 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN11O75508 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN11O75508 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN11O75508 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
CLDN11O75508 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN11O75508 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN11O75508 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN11O75508 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN11O75508 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN11O75508 CCT8L1P-201ENST00000465400 1674 ntBASIC14.77□□□□□ -0.05
CLDN11O75508 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN11O75508 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN11O75508 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN11O75508 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN11O75508 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN11O75508 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN11O75508 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN11O75508 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN11O75508 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN11O75508 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN11O75508 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN11O75508 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN11O75508 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN11O75508 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms