Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.66□□□□□ -0.22
TRIM3O75382 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
TRIM3O75382 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRIM3O75382 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRIM3O75382 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM3O75382 AC015818.8-201ENST00000587907 1519 ntBASIC13.65□□□□□ -0.22
TRIM3O75382 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM3O75382 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
TRIM3O75382 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.65□□□□□ -0.22
TRIM3O75382 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
TRIM3O75382 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 RN7SKP175-201ENST00000408472 289 ntBASIC13.65□□□□□ -0.22
TRIM3O75382 TLE1P1-201ENST00000422965 589 ntBASIC13.65□□□□□ -0.22
TRIM3O75382 CHMP1AP1-201ENST00000445563 662 ntBASIC13.65□□□□□ -0.22
TRIM3O75382 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
TRIM3O75382 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRIM3O75382 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRIM3O75382 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.65□□□□□ -0.22
TRIM3O75382 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.65□□□□□ -0.22
TRIM3O75382 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 KRT8P4-201ENST00000509735 1454 ntBASIC13.65□□□□□ -0.22
TRIM3O75382 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 INTS4P1-203ENST00000641008 3683 ntBASIC13.65□□□□□ -0.22
TRIM3O75382 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRIM3O75382 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.65□□□□□ -0.22
TRIM3O75382 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TRIM3O75382 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.65□□□□□ -0.22
TRIM3O75382 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRIM3O75382 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.65□□□□□ -0.22
TRIM3O75382 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.65□□□□□ -0.23
TRIM3O75382 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TRIM3O75382 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.64□□□□□ -0.23
TRIM3O75382 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRIM3O75382 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 AC011840.2-201ENST00000563063 1520 ntBASIC13.64□□□□□ -0.23
TRIM3O75382 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
TRIM3O75382 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRIM3O75382 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRIM3O75382 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM3O75382 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRIM3O75382 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRIM3O75382 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.64□□□□□ -0.23
TRIM3O75382 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM3O75382 AC011474.4-201ENST00000623523 2076 ntBASIC13.64□□□□□ -0.23
TRIM3O75382 INE2-201ENST00000630399 1874 ntBASIC13.64□□□□□ -0.23
TRIM3O75382 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRIM3O75382 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM3O75382 AC003102.2-201ENST00000589195 1469 ntBASIC13.64□□□□□ -0.23
TRIM3O75382 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 MIR326-201ENST00000362220 95 ntBASIC13.64□□□□□ -0.23
TRIM3O75382 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 AC007969.1-201ENST00000433675 447 ntBASIC13.64□□□□□ -0.23
TRIM3O75382 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.64□□□□□ -0.23
TRIM3O75382 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRIM3O75382 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.64□□□□□ -0.23
TRIM3O75382 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.64□□□□□ -0.23
TRIM3O75382 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM3O75382 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.64□□□□□ -0.23
TRIM3O75382 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.64□□□□□ -0.23
TRIM3O75382 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM3O75382 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.64□□□□□ -0.23
TRIM3O75382 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.64□□□□□ -0.23
TRIM3O75382 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRIM3O75382 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms