Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 LINC02486-201ENST00000604157 3000 ntBASIC11.92□□□□□ -0.5
SSSCA1O60232 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.91□□□□□ -0.5
SSSCA1O60232 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.91□□□□□ -0.5
SSSCA1O60232 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.91□□□□□ -0.5
SSSCA1O60232 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
SSSCA1O60232 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SSSCA1O60232 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.91□□□□□ -0.5
SSSCA1O60232 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SSSCA1O60232 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SSSCA1O60232 AC003102.2-201ENST00000589195 1469 ntBASIC11.91□□□□□ -0.5
SSSCA1O60232 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SSSCA1O60232 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.91□□□□□ -0.5
SSSCA1O60232 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.91□□□□□ -0.5
SSSCA1O60232 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.91□□□□□ -0.5
SSSCA1O60232 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.91□□□□□ -0.5
SSSCA1O60232 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC11.91□□□□□ -0.5
SSSCA1O60232 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.91□□□□□ -0.5
SSSCA1O60232 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.91□□□□□ -0.5
SSSCA1O60232 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC11.91□□□□□ -0.5
SSSCA1O60232 AP000344.2-201ENST00000512987 629 ntBASIC11.91□□□□□ -0.5
SSSCA1O60232 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SSSCA1O60232 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.91□□□□□ -0.5
SSSCA1O60232 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 AC044860.1-202ENST00000559481 777 ntBASIC11.91□□□□□ -0.5
SSSCA1O60232 DUX4L47-201ENST00000566374 394 ntBASIC11.91□□□□□ -0.5
SSSCA1O60232 KLK8-205ENST00000593490 267 ntTSL 3 BASIC11.91□□□□□ -0.5
SSSCA1O60232 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.91□□□□□ -0.5
SSSCA1O60232 AL138828.2-201ENST00000615812 383 ntBASIC11.91□□□□□ -0.5
SSSCA1O60232 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SSSCA1O60232 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.91□□□□□ -0.5
SSSCA1O60232 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SSSCA1O60232 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
SSSCA1O60232 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
SSSCA1O60232 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SSSCA1O60232 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
SSSCA1O60232 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.91□□□□□ -0.5
SSSCA1O60232 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SSSCA1O60232 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SSSCA1O60232 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
SSSCA1O60232 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.9□□□□□ -0.5
SSSCA1O60232 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.9□□□□□ -0.5
SSSCA1O60232 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.9□□□□□ -0.5
SSSCA1O60232 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SSSCA1O60232 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms