Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UPK1AO00322 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UPK1AO00322 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK1AO00322 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1AO00322 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1AO00322 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK1AO00322 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1AO00322 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1AO00322 MIR1202-201ENST00000408529 83 ntBASIC13.79□□□□□ -0.2
UPK1AO00322 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
UPK1AO00322 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 RPL7P3-201ENST00000441388 714 ntBASIC13.79□□□□□ -0.2
UPK1AO00322 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UPK1AO00322 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.79□□□□□ -0.2
UPK1AO00322 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK1AO00322 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.79□□□□□ -0.2
UPK1AO00322 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UPK1AO00322 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.79□□□□□ -0.2
UPK1AO00322 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK1AO00322 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 RHOXF1P1-202ENST00000635473 501 ntBASIC13.79□□□□□ -0.2
UPK1AO00322 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1AO00322 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
UPK1AO00322 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
UPK1AO00322 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK1AO00322 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1AO00322 PTENP1-202ENST00000532280 3996 ntBASIC13.79□□□□□ -0.2
UPK1AO00322 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
UPK1AO00322 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK1AO00322 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
UPK1AO00322 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK1AO00322 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
UPK1AO00322 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
UPK1AO00322 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.78□□□□□ -0.2
UPK1AO00322 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.78□□□□□ -0.2
UPK1AO00322 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
UPK1AO00322 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 BEND3P3-201ENST00000611030 2440 ntBASIC13.78□□□□□ -0.2
UPK1AO00322 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.78□□□□□ -0.2
UPK1AO00322 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.78□□□□□ -0.2
UPK1AO00322 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.78□□□□□ -0.2
UPK1AO00322 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.78□□□□□ -0.2
UPK1AO00322 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.78□□□□□ -0.2
UPK1AO00322 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.78□□□□□ -0.2
UPK1AO00322 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
UPK1AO00322 KRT17P8-201ENST00000540749 863 ntBASIC13.78□□□□□ -0.2
UPK1AO00322 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.78□□□□□ -0.2
UPK1AO00322 C2orf69P2-201ENST00000562032 1123 ntBASIC13.78□□□□□ -0.2
UPK1AO00322 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.78□□□□□ -0.2
UPK1AO00322 AL162274.1-201ENST00000617191 1098 ntBASIC13.78□□□□□ -0.2
UPK1AO00322 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 AHCYP2-201ENST00000430630 1300 ntBASIC13.78□□□□□ -0.2
UPK1AO00322 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UPK1AO00322 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms