Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 LBX2-201ENST00000341396 886 ntTSL 3 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 AL035414.1-201ENST00000451327 857 ntBASIC11.73□□□□□ -0.53
SRRM4A7MD48 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 CROCCP4-201ENST00000457096 498 ntBASIC11.73□□□□□ -0.53
SRRM4A7MD48 TMEM198B-204ENST00000484016 896 ntBASIC11.73□□□□□ -0.53
SRRM4A7MD48 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 AC005586.2-201ENST00000563946 837 ntBASIC11.73□□□□□ -0.53
SRRM4A7MD48 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 PPP1R26P4-201ENST00000619065 3527 ntBASIC11.73□□□□□ -0.53
SRRM4A7MD48 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SRRM4A7MD48 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
SRRM4A7MD48 AC111170.3-201ENST00000624282 2464 ntBASIC11.72□□□□□ -0.53
SRRM4A7MD48 AGAP10P-201ENST00000454844 2418 ntBASIC11.72□□□□□ -0.53
SRRM4A7MD48 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 AHCYP2-201ENST00000430630 1300 ntBASIC11.72□□□□□ -0.53
SRRM4A7MD48 TUBB8P4-201ENST00000511806 1324 ntBASIC11.72□□□□□ -0.53
SRRM4A7MD48 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 AC010141.1-201ENST00000411585 623 ntBASIC11.72□□□□□ -0.53
SRRM4A7MD48 HNRNPA1P27-201ENST00000412087 955 ntBASIC11.72□□□□□ -0.53
SRRM4A7MD48 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 AP000812.2-201ENST00000538934 718 ntBASIC11.72□□□□□ -0.53
SRRM4A7MD48 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 PPY2P-201ENST00000582808 702 ntBASIC11.72□□□□□ -0.53
SRRM4A7MD48 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 AC104506.1-201ENST00000609247 429 ntBASIC11.72□□□□□ -0.53
SRRM4A7MD48 ZACNP1-201ENST00000612259 710 ntBASIC11.72□□□□□ -0.53
SRRM4A7MD48 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms