Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRRM3A6NNA2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 AC091804.1-201ENST00000486888 567 ntBASIC15.14■□□□□ 0.01
SRRM3A6NNA2 HIST2H2BC-201ENST00000498492 580 ntBASIC15.14■□□□□ 0.01
SRRM3A6NNA2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 AC015910.1-201ENST00000579400 975 ntBASIC15.14■□□□□ 0.01
SRRM3A6NNA2 MIR3619-201ENST00000579667 83 ntBASIC15.14■□□□□ 0.01
SRRM3A6NNA2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 CICP16-201ENST00000502609 2813 ntBASIC15.14■□□□□ 0.01
SRRM3A6NNA2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 AC012617.1-204ENST00000586340 2305 ntBASIC15.14■□□□□ 0.01
SRRM3A6NNA2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.14■□□□□ 0.01
SRRM3A6NNA2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 AC011840.2-201ENST00000563063 1520 ntBASIC15.13■□□□□ 0.01
SRRM3A6NNA2 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 AZGP1P1-201ENST00000411909 902 ntBASIC15.13■□□□□ 0.01
SRRM3A6NNA2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 MIR4750-201ENST00000584564 56 ntBASIC15.13■□□□□ 0.01
SRRM3A6NNA2 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 AC138627.1-207ENST00000641560 1006 ntBASIC15.13■□□□□ 0.01
SRRM3A6NNA2 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRRM3A6NNA2 KHSRPP1-201ENST00000427983 1768 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms