Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RCL1Q9Y2P8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 AL590627.1-203ENST00000421194 1026 ntBASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 TLE1P1-201ENST00000422965 589 ntBASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 NMU-202ENST00000505262 693 ntTSL 3 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 AC107373.2-201ENST00000607735 490 ntBASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 AL158212.4-201ENST00000624062 1286 ntBASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 ELL2P1-201ENST00000413990 1906 ntBASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 AC003102.2-201ENST00000589195 1469 ntBASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
RCL1Q9Y2P8 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 AL138799.1-201ENST00000448213 1675 ntBASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RCL1Q9Y2P8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms