Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LHX6Q9UPM6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.06□□□□□ -0.16
LHX6Q9UPM6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LHX6Q9UPM6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AC007326.2-201ENST00000624224 7579 ntBASIC14.05□□□□□ -0.16
LHX6Q9UPM6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AC239868.1-201ENST00000369385 493 ntBASIC14.05□□□□□ -0.16
LHX6Q9UPM6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AC023141.7-201ENST00000430646 407 ntBASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AC013402.3-201ENST00000438566 451 ntTSL 2 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 FAM86B3P-203ENST00000523992 854 ntBASIC14.05□□□□□ -0.16
LHX6Q9UPM6 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AC004686.1-201ENST00000605113 538 ntBASIC14.05□□□□□ -0.16
LHX6Q9UPM6 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AL162426.1-201ENST00000624141 743 ntBASIC14.05□□□□□ -0.16
LHX6Q9UPM6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AC090502.4-201ENST00000551714 1386 ntBASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AL596087.1-201ENST00000400979 1969 ntBASIC14.05□□□□□ -0.16
LHX6Q9UPM6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AL157902.2-201ENST00000623435 1492 ntBASIC14.05□□□□□ -0.16
LHX6Q9UPM6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 AC126177.1-201ENST00000547829 2218 ntBASIC14.05□□□□□ -0.16
LHX6Q9UPM6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
LHX6Q9UPM6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 TNRC18P2-201ENST00000417666 2714 ntBASIC14.04□□□□□ -0.16
LHX6Q9UPM6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 RPL5P23-201ENST00000496040 868 ntBASIC14.04□□□□□ -0.16
LHX6Q9UPM6 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 AC010203.1-201ENST00000548404 928 ntTSL 3 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 AL109837.1-201ENST00000603272 613 ntBASIC14.04□□□□□ -0.16
LHX6Q9UPM6 PEBP1P2-201ENST00000603980 558 ntBASIC14.04□□□□□ -0.16
LHX6Q9UPM6 AL627230.2-201ENST00000613254 655 ntBASIC14.04□□□□□ -0.16
LHX6Q9UPM6 AL354696.1-201ENST00000614652 497 ntBASIC14.04□□□□□ -0.16
LHX6Q9UPM6 AC006927.2-201ENST00000639256 389 ntBASIC14.04□□□□□ -0.16
LHX6Q9UPM6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 AC023050.4-201ENST00000538830 1380 ntBASIC14.04□□□□□ -0.16
LHX6Q9UPM6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX6Q9UPM6 AL359641.1-201ENST00000412509 1558 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms