Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 AL354877.1-201ENST00000424412 413 ntBASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 KLF2P1-201ENST00000447438 1042 ntBASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 SCARNA20.5-201ENST00000516991 142 ntBASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 AC005730.2-201ENST00000564549 1184 ntBASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 AC244394.1-201ENST00000435000 1665 ntBASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CUEDC1Q9NWM3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 AC012617.1-204ENST00000586340 2305 ntBASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 BTBD6P1-201ENST00000412176 1267 ntBASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 AC253536.4-201ENST00000440539 267 ntBASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 AC011498.7-201ENST00000624986 2027 ntBASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.13□□□□□ -0.15
CUEDC1Q9NWM3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms