Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 CR383656.2-201ENST00000548656 2254 ntBASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 MEP1AP4-201ENST00000423244 1087 ntBASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 AC114501.2-201ENST00000439631 535 ntBASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 BNIP3P42-201ENST00000454982 569 ntBASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 BNIP3P29-201ENST00000598302 571 ntBASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 AC011447.5-201ENST00000616168 564 ntBASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 AL109936.8-201ENST00000641772 604 ntBASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
CCM2LQ9NUG4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 BCYRN1-201ENST00000418539 200 ntBASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 CROCCP4-201ENST00000457096 498 ntBASIC13.91□□□□□ -0.18
CCM2LQ9NUG4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms