Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SNX18Q96RF0 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SNX18Q96RF0 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 EIF3FP3-201ENST00000434851 1086 ntBASIC13.36□□□□□ -0.27
SNX18Q96RF0 ATP5G2P4-201ENST00000442175 420 ntBASIC13.36□□□□□ -0.27
SNX18Q96RF0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 AC133539.2-201ENST00000604757 467 ntBASIC13.36□□□□□ -0.27
SNX18Q96RF0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 AC106818.1-201ENST00000623223 3242 ntBASIC13.36□□□□□ -0.27
SNX18Q96RF0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SNX18Q96RF0 AC068760.1-201ENST00000493579 1953 ntBASIC13.36□□□□□ -0.27
SNX18Q96RF0 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
SNX18Q96RF0 AC003102.2-201ENST00000589195 1469 ntBASIC13.36□□□□□ -0.27
SNX18Q96RF0 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SNX18Q96RF0 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SNX18Q96RF0 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms