Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP53Q96M91 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC19.38■□□□□ 0.69
CFAP53Q96M91 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CFAP53Q96M91 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP53Q96M91 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP53Q96M91 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP53Q96M91 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP53Q96M91 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC19.38■□□□□ 0.69
CFAP53Q96M91 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
CFAP53Q96M91 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP53Q96M91 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP53Q96M91 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP53Q96M91 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP53Q96M91 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP53Q96M91 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP53Q96M91 ISCA2P1-201ENST00000425548 448 ntBASIC19.37■□□□□ 0.69
CFAP53Q96M91 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 AL161670.2-201ENST00000557650 1227 ntBASIC19.37■□□□□ 0.69
CFAP53Q96M91 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP53Q96M91 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP53Q96M91 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP53Q96M91 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC19.37■□□□□ 0.69
CFAP53Q96M91 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP53Q96M91 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CFAP53Q96M91 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 AP002353.1-201ENST00000528257 1599 ntBASIC19.36■□□□□ 0.69
CFAP53Q96M91 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 AC024681.1-201ENST00000521917 487 ntBASIC19.36■□□□□ 0.69
CFAP53Q96M91 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.36■□□□□ 0.69
CFAP53Q96M91 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 FAM45BP-202ENST00000592932 1624 ntBASIC19.36■□□□□ 0.69
CFAP53Q96M91 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CFAP53Q96M91 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CFAP53Q96M91 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CFAP53Q96M91 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CFAP53Q96M91 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CFAP53Q96M91 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CFAP53Q96M91 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC19.35■□□□□ 0.69
CFAP53Q96M91 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CFAP53Q96M91 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CFAP53Q96M91 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CFAP53Q96M91 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CFAP53Q96M91 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CFAP53Q96M91 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms