Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
DDX11Q96FC9 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.34■□□□□ 0.37
DDX11Q96FC9 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DDX11Q96FC9 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.34■□□□□ 0.37
DDX11Q96FC9 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DDX11Q96FC9 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
DDX11Q96FC9 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.34■□□□□ 0.37
DDX11Q96FC9 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX11Q96FC9 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
DDX11Q96FC9 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
DDX11Q96FC9 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
DDX11Q96FC9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
DDX11Q96FC9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DDX11Q96FC9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.33■□□□□ 0.37
DDX11Q96FC9 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
DDX11Q96FC9 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DDX11Q96FC9 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.33■□□□□ 0.37
DDX11Q96FC9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DDX11Q96FC9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.33■□□□□ 0.37
DDX11Q96FC9 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DDX11Q96FC9 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
DDX11Q96FC9 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
DDX11Q96FC9 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX11Q96FC9 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
DDX11Q96FC9 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
DDX11Q96FC9 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.33■□□□□ 0.36
DDX11Q96FC9 HIST2H2BC-201ENST00000498492 580 ntBASIC17.33■□□□□ 0.36
DDX11Q96FC9 FTLP10-202ENST00000505798 471 ntBASIC17.33■□□□□ 0.36
DDX11Q96FC9 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX11Q96FC9 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.33■□□□□ 0.36
DDX11Q96FC9 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.33■□□□□ 0.36
DDX11Q96FC9 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX11Q96FC9 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.33■□□□□ 0.36
DDX11Q96FC9 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 AC136759.1-202ENST00000530858 2194 ntBASIC17.33■□□□□ 0.36
DDX11Q96FC9 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC17.33■□□□□ 0.36
DDX11Q96FC9 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
DDX11Q96FC9 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.33■□□□□ 0.36
DDX11Q96FC9 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DDX11Q96FC9 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
DDX11Q96FC9 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 AC015688.4-201ENST00000580780 1647 ntBASIC17.32■□□□□ 0.36
DDX11Q96FC9 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX11Q96FC9 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX11Q96FC9 AC009093.2-202ENST00000620513 2079 ntBASIC17.32■□□□□ 0.36
DDX11Q96FC9 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DDX11Q96FC9 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DDX11Q96FC9 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX11Q96FC9 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 FKBP4P6-201ENST00000457486 1332 ntBASIC17.32■□□□□ 0.36
DDX11Q96FC9 MRPL37P1-201ENST00000592451 1337 ntBASIC17.32■□□□□ 0.36
DDX11Q96FC9 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX11Q96FC9 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 EIF4HP1-201ENST00000453115 687 ntBASIC17.32■□□□□ 0.36
DDX11Q96FC9 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 RHOQP1-201ENST00000555758 579 ntBASIC17.32■□□□□ 0.36
DDX11Q96FC9 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX11Q96FC9 AC106820.3-201ENST00000561653 397 ntBASIC17.32■□□□□ 0.36
DDX11Q96FC9 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DDX11Q96FC9 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 AC138696.2-201ENST00000607376 223 ntBASIC17.32■□□□□ 0.36
DDX11Q96FC9 AC138466.3-201ENST00000619983 221 ntBASIC17.32■□□□□ 0.36
DDX11Q96FC9 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
DDX11Q96FC9 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX11Q96FC9 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX11Q96FC9 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX11Q96FC9 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX11Q96FC9 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 AC067750.1-201ENST00000608826 6545 ntBASIC17.32■□□□□ 0.36
DDX11Q96FC9 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
DDX11Q96FC9 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
DDX11Q96FC9 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
DDX11Q96FC9 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
DDX11Q96FC9 FUK-202ENST00000378912 3925 ntTSL 2 BASIC17.31■□□□□ 0.36
DDX11Q96FC9 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms