Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC10.92□□□□□ -0.66
RNF183Q96D59 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
RNF183Q96D59 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC10.92□□□□□ -0.66
RNF183Q96D59 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC10.92□□□□□ -0.66
RNF183Q96D59 AC103810.3-201ENST00000583567 96 ntBASIC10.92□□□□□ -0.66
RNF183Q96D59 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC10.92□□□□□ -0.66
RNF183Q96D59 AC004466.1-201ENST00000599515 1080 ntBASIC10.92□□□□□ -0.66
RNF183Q96D59 GPR182-203ENST00000622922 591 ntBASIC10.92□□□□□ -0.66
RNF183Q96D59 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC10.92□□□□□ -0.66
RNF183Q96D59 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 ABR-228ENST00000574437 3196 ntTSL 5 BASIC10.92□□□□□ -0.66
RNF183Q96D59 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
RNF183Q96D59 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC10.92□□□□□ -0.66
RNF183Q96D59 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
RNF183Q96D59 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.92□□□□□ -0.66
RNF183Q96D59 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.92□□□□□ -0.66
RNF183Q96D59 AP000593.2-201ENST00000542775 1433 ntBASIC10.92□□□□□ -0.66
RNF183Q96D59 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RNF183Q96D59 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
RNF183Q96D59 LILRP1-201ENST00000444199 1370 ntBASIC10.91□□□□□ -0.66
RNF183Q96D59 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC10.91□□□□□ -0.66
RNF183Q96D59 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
RNF183Q96D59 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
RNF183Q96D59 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 AC023024.2-201ENST00000623561 1993 ntBASIC10.91□□□□□ -0.66
RNF183Q96D59 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 MIR663B-201ENST00000408361 115 ntBASIC10.91□□□□□ -0.66
RNF183Q96D59 TISP43-201ENST00000409793 538 ntTSL 4 BASIC10.91□□□□□ -0.66
RNF183Q96D59 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC10.91□□□□□ -0.66
RNF183Q96D59 POM121L10P-201ENST00000436994 1285 ntBASIC10.91□□□□□ -0.66
RNF183Q96D59 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC10.91□□□□□ -0.66
RNF183Q96D59 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 KRT8P13-201ENST00000463294 1010 ntBASIC10.91□□□□□ -0.66
RNF183Q96D59 ATP6V0CP2-201ENST00000469409 207 ntBASIC10.91□□□□□ -0.66
RNF183Q96D59 CDC23-208ENST00000505120 455 ntTSL 3 BASIC10.91□□□□□ -0.66
RNF183Q96D59 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC10.91□□□□□ -0.66
RNF183Q96D59 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC10.91□□□□□ -0.66
RNF183Q96D59 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC10.91□□□□□ -0.66
RNF183Q96D59 AC244093.1-201ENST00000610837 814 ntBASIC10.91□□□□□ -0.66
RNF183Q96D59 AC005695.3-201ENST00000614522 232 ntBASIC10.91□□□□□ -0.66
RNF183Q96D59 AL008638.5-201ENST00000623814 1298 ntBASIC10.91□□□□□ -0.66
RNF183Q96D59 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
RNF183Q96D59 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC10.91□□□□□ -0.66
RNF183Q96D59 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC10.91□□□□□ -0.66
RNF183Q96D59 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
RNF183Q96D59 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
RNF183Q96D59 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC10.91□□□□□ -0.66
RNF183Q96D59 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
RNF183Q96D59 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC10.91□□□□□ -0.66
RNF183Q96D59 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC10.91□□□□□ -0.66
RNF183Q96D59 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RNF183Q96D59 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF183Q96D59 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF183Q96D59 AC092117.1-201ENST00000621230 3250 ntBASIC10.9□□□□□ -0.66
RNF183Q96D59 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF183Q96D59 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF183Q96D59 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC10.9□□□□□ -0.66
RNF183Q96D59 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC10.9□□□□□ -0.66
RNF183Q96D59 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF183Q96D59 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF183Q96D59 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RNF183Q96D59 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RNF183Q96D59 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC10.9□□□□□ -0.66
RNF183Q96D59 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms