Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM54Q969K7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM54Q969K7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM54Q969K7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
TMEM54Q969K7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
TMEM54Q969K7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM54Q969K7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM54Q969K7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.77□□□□□ -0.36
TMEM54Q969K7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM54Q969K7 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM54Q969K7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 XBP1P1-201ENST00000436573 652 ntBASIC12.77□□□□□ -0.37
TMEM54Q969K7 OR2R1P-201ENST00000441404 914 ntBASIC12.77□□□□□ -0.37
TMEM54Q969K7 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 AC091271.1-201ENST00000611877 1162 ntBASIC12.77□□□□□ -0.37
TMEM54Q969K7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 AC068587.8-201ENST00000641239 219 ntBASIC12.77□□□□□ -0.37
TMEM54Q969K7 AC004923.1-202ENST00000642106 209 ntBASIC12.77□□□□□ -0.37
TMEM54Q969K7 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TMEM54Q969K7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.77□□□□□ -0.37
TMEM54Q969K7 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 AC018629.1-201ENST00000623381 1736 ntBASIC12.76□□□□□ -0.37
TMEM54Q969K7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.76□□□□□ -0.37
TMEM54Q969K7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 TMEM198B-204ENST00000484016 896 ntBASIC12.76□□□□□ -0.37
TMEM54Q969K7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 RN7SL163P-201ENST00000583100 276 ntBASIC12.76□□□□□ -0.37
TMEM54Q969K7 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 AL008721.1-201ENST00000609964 604 ntBASIC12.76□□□□□ -0.37
TMEM54Q969K7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TMEM54Q969K7 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
TMEM54Q969K7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms