Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TM9SF4Q92544 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TM9SF4Q92544 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 KRT8P19-201ENST00000551916 1455 ntBASIC13.8□□□□□ -0.2
TM9SF4Q92544 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 SPTLC1P5-201ENST00000450718 252 ntBASIC13.8□□□□□ -0.2
TM9SF4Q92544 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 AC005730.2-201ENST00000564549 1184 ntBASIC13.8□□□□□ -0.2
TM9SF4Q92544 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 AC002472.3-201ENST00000640124 621 ntBASIC13.8□□□□□ -0.2
TM9SF4Q92544 AC004923.1-202ENST00000642106 209 ntBASIC13.8□□□□□ -0.2
TM9SF4Q92544 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 AC092135.3-201ENST00000624151 1846 ntBASIC13.8□□□□□ -0.2
TM9SF4Q92544 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TM9SF4Q92544 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.8□□□□□ -0.2
TM9SF4Q92544 AC018442.1-201ENST00000421439 2061 ntBASIC13.79□□□□□ -0.2
TM9SF4Q92544 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.79□□□□□ -0.2
TM9SF4Q92544 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TM9SF4Q92544 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms