Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 AC006122.1-201ENST00000493323 440 ntBASIC15.4■□□□□ 0.06
UBA3Q8TBC4 AC044849.1-201ENST00000519737 1188 ntBASIC15.4■□□□□ 0.06
UBA3Q8TBC4 AC126915.1-201ENST00000522847 1038 ntBASIC15.4■□□□□ 0.06
UBA3Q8TBC4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
UBA3Q8TBC4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
UBA3Q8TBC4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 HSPA7-201ENST00000445535 1927 ntBASIC15.39■□□□□ 0.05
UBA3Q8TBC4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 DPM3-202ENST00000368399 517 ntBASIC15.39■□□□□ 0.05
UBA3Q8TBC4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 NKAIN1P1-201ENST00000435754 582 ntBASIC15.39■□□□□ 0.05
UBA3Q8TBC4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 SERPINA13P-202ENST00000478994 924 ntBASIC15.39■□□□□ 0.05
UBA3Q8TBC4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 HLA-J-204ENST00000495278 958 ntBASIC15.39■□□□□ 0.05
UBA3Q8TBC4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 RN7SL163P-201ENST00000583100 276 ntBASIC15.39■□□□□ 0.05
UBA3Q8TBC4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 AL451050.2-201ENST00000606967 682 ntBASIC15.39■□□□□ 0.05
UBA3Q8TBC4 AL022328.3-201ENST00000607943 679 ntBASIC15.39■□□□□ 0.05
UBA3Q8TBC4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 MIR6799-201ENST00000620297 69 ntBASIC15.39■□□□□ 0.05
UBA3Q8TBC4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 ST20-AS1-201ENST00000560255 4223 ntBASIC15.39■□□□□ 0.05
UBA3Q8TBC4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
UBA3Q8TBC4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms