Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ARHGEF39Q8N4T4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 MYO15B-237ENST00000642007 4893 ntBASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 NUP210P1-202ENST00000504322 710 ntBASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 AC090857.1-201ENST00000527400 390 ntBASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 AC091812.3-201ENST00000621362 345 ntBASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 AL136379.1-201ENST00000623471 2642 ntBASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ARHGEF39Q8N4T4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 AL161772.1-201ENST00000610494 4412 ntBASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 AC007686.3-201ENST00000619017 3487 ntBASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 AC152010.1-201ENST00000415779 2006 ntBASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 INTS4P1-203ENST00000641008 3683 ntBASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 AL662890.1-201ENST00000396818 632 ntBASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 SLC25A24P2-201ENST00000415059 510 ntBASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 AC242376.1-201ENST00000559033 726 ntBASIC13.63□□□□□ -0.23
ARHGEF39Q8N4T4 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms