Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 AQP7P5-201ENST00000428759 1049 ntBASIC15.67■□□□□ 0.1
HERC6Q8IVU3 RPL35P9-201ENST00000446059 350 ntBASIC15.67■□□□□ 0.1
HERC6Q8IVU3 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 AQP7P4-201ENST00000447083 1042 ntBASIC15.67■□□□□ 0.1
HERC6Q8IVU3 AQP7P2-201ENST00000453967 1041 ntBASIC15.67■□□□□ 0.1
HERC6Q8IVU3 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 MIR2392-201ENST00000584881 84 ntBASIC15.67■□□□□ 0.1
HERC6Q8IVU3 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 AC148477.9-201ENST00000623974 539 ntBASIC15.67■□□□□ 0.1
HERC6Q8IVU3 AQP7P3-201ENST00000624547 1041 ntBASIC15.67■□□□□ 0.1
HERC6Q8IVU3 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HERC6Q8IVU3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 FAM90A21P-201ENST00000510875 1396 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 FAM90A15P-201ENST00000514465 1395 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 FAM90A6P-201ENST00000515148 1394 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 FAM90A16P-201ENST00000526662 1395 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 FAM90A9P-201ENST00000527940 1395 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 FAM90A5P-201ENST00000528738 1395 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 FAM90A14P-201ENST00000530386 1395 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 FAM90A13P-201ENST00000534703 1395 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 DDX39AP1-201ENST00000445147 1181 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 RN7SL277P-201ENST00000481521 288 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 AC124068.2-201ENST00000569473 1109 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 AC007250.1-201ENST00000608934 338 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 AL590440.2-201ENST00000641973 1595 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 MRPL37P1-201ENST00000592451 1337 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 AL009178.2-201ENST00000597278 2719 ntBASIC15.66■□□□□ 0.1
HERC6Q8IVU3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HERC6Q8IVU3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HERC6Q8IVU3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms