Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CACNA1BQ00975 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC13.26□□□□□ -0.29
CACNA1BQ00975 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CACNA1BQ00975 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CACNA1BQ00975 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CACNA1BQ00975 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CACNA1BQ00975 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CACNA1BQ00975 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CACNA1BQ00975 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.26□□□□□ -0.29
CACNA1BQ00975 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.26□□□□□ -0.29
CACNA1BQ00975 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CACNA1BQ00975 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CACNA1BQ00975 AP002353.1-201ENST00000528257 1599 ntBASIC13.26□□□□□ -0.29
CACNA1BQ00975 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC13.26□□□□□ -0.29
CACNA1BQ00975 AC078925.2-201ENST00000624013 1973 ntBASIC13.25□□□□□ -0.29
CACNA1BQ00975 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 VENTXP3-201ENST00000546480 773 ntBASIC13.25□□□□□ -0.29
CACNA1BQ00975 KRT8P2-201ENST00000556193 944 ntBASIC13.25□□□□□ -0.29
CACNA1BQ00975 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 AC009041.4-201ENST00000620075 638 ntBASIC13.25□□□□□ -0.29
CACNA1BQ00975 AC099552.4-201ENST00000624248 949 ntBASIC13.25□□□□□ -0.29
CACNA1BQ00975 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 FLJ38576-201ENST00000623820 2459 ntBASIC13.25□□□□□ -0.29
CACNA1BQ00975 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.25□□□□□ -0.29
CACNA1BQ00975 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 RPSAP12-201ENST00000435879 888 ntBASIC13.25□□□□□ -0.29
CACNA1BQ00975 RPS15P5-201ENST00000449885 432 ntBASIC13.25□□□□□ -0.29
CACNA1BQ00975 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 AL359091.4-201ENST00000610052 409 ntBASIC13.25□□□□□ -0.29
CACNA1BQ00975 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 ALOX12P2-203ENST00000570921 1945 ntBASIC13.25□□□□□ -0.29
CACNA1BQ00975 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.25□□□□□ -0.29
CACNA1BQ00975 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CACNA1BQ00975 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CACNA1BQ00975 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
CACNA1BQ00975 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CACNA1BQ00975 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CACNA1BQ00975 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CACNA1BQ00975 AC003102.2-201ENST00000589195 1469 ntBASIC13.24□□□□□ -0.29
CACNA1BQ00975 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CACNA1BQ00975 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.24□□□□□ -0.29
CACNA1BQ00975 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.24□□□□□ -0.29
CACNA1BQ00975 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.24□□□□□ -0.29
CACNA1BQ00975 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CACNA1BQ00975 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CACNA1BQ00975 AL161727.1-201ENST00000457409 530 ntBASIC13.24□□□□□ -0.29
CACNA1BQ00975 RN7SL677P-201ENST00000466970 319 ntBASIC13.24□□□□□ -0.29
CACNA1BQ00975 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.24□□□□□ -0.29
CACNA1BQ00975 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC13.24□□□□□ -0.29
CACNA1BQ00975 RPS5-205ENST00000598495 800 ntTSL 3 BASIC13.24□□□□□ -0.29
CACNA1BQ00975 BX088702.1-201ENST00000610784 235 ntBASIC13.24□□□□□ -0.29
CACNA1BQ00975 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.24□□□□□ -0.29
CACNA1BQ00975 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CACNA1BQ00975 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms