Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H3AP68431 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H3AP68431 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H3AP68431 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H3AP68431 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H3AP68431 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HIST1H3AP68431 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H3AP68431 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H3AP68431 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H3AP68431 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H3AP68431 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H3AP68431 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H3AP68431 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.73□□□□□ -0.37
HIST1H3AP68431 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.73□□□□□ -0.37
HIST1H3AP68431 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H3AP68431 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HIST1H3AP68431 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 AC079178.1-201ENST00000420915 656 ntBASIC12.72□□□□□ -0.37
HIST1H3AP68431 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 ST13P19-201ENST00000442505 1124 ntBASIC12.72□□□□□ -0.37
HIST1H3AP68431 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 AC244394.1-201ENST00000435000 1665 ntBASIC12.72□□□□□ -0.37
HIST1H3AP68431 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 AL022313.4-201ENST00000562756 2046 ntBASIC12.72□□□□□ -0.37
HIST1H3AP68431 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
HIST1H3AP68431 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HIST1H3AP68431 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H3AP68431 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H3AP68431 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H3AP68431 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H3AP68431 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H3AP68431 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H3AP68431 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H3AP68431 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H3AP68431 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H3AP68431 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H3AP68431 AL008718.2-201ENST00000609206 1313 ntBASIC12.71□□□□□ -0.37
HIST1H3AP68431 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 AC005252.3-201ENST00000623855 2258 ntBASIC12.71□□□□□ -0.37
HIST1H3AP68431 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H3AP68431 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.71□□□□□ -0.37
HIST1H3AP68431 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HIST1H3AP68431 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms