Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
NR1H2P55055 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.91□□□□□ -0.18
NR1H2P55055 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H2P55055 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H2P55055 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.91□□□□□ -0.18
NR1H2P55055 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H2P55055 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.91□□□□□ -0.18
NR1H2P55055 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.91□□□□□ -0.18
NR1H2P55055 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
NR1H2P55055 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.91□□□□□ -0.18
NR1H2P55055 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NR1H2P55055 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.91□□□□□ -0.18
NR1H2P55055 SLC7A15P-201ENST00000424028 1363 ntBASIC13.91□□□□□ -0.18
NR1H2P55055 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.91□□□□□ -0.18
NR1H2P55055 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.91□□□□□ -0.18
NR1H2P55055 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NR1H2P55055 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NR1H2P55055 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H2P55055 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NR1H2P55055 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NR1H2P55055 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H2P55055 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H2P55055 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
NR1H2P55055 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NR1H2P55055 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H2P55055 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.9□□□□□ -0.18
NR1H2P55055 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NR1H2P55055 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.9□□□□□ -0.18
NR1H2P55055 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NR1H2P55055 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
NR1H2P55055 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.9□□□□□ -0.18
NR1H2P55055 ATP5G2P4-201ENST00000442175 420 ntBASIC13.9□□□□□ -0.18
NR1H2P55055 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H2P55055 RN7SL752P-201ENST00000463779 287 ntBASIC13.9□□□□□ -0.18
NR1H2P55055 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.9□□□□□ -0.18
NR1H2P55055 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
NR1H2P55055 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H2P55055 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.9□□□□□ -0.18
NR1H2P55055 RRP7BP-205ENST00000566851 833 ntBASIC13.9□□□□□ -0.18
NR1H2P55055 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 AC004461.2-201ENST00000629517 803 ntBASIC13.9□□□□□ -0.18
NR1H2P55055 AL109936.8-201ENST00000641772 604 ntBASIC13.9□□□□□ -0.18
NR1H2P55055 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H2P55055 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H2P55055 CYP4F24P-201ENST00000586049 1580 ntBASIC13.9□□□□□ -0.18
NR1H2P55055 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NR1H2P55055 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H2P55055 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H2P55055 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
NR1H2P55055 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.9□□□□□ -0.18
NR1H2P55055 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NR1H2P55055 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR1H2P55055 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.9□□□□□ -0.18
NR1H2P55055 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.9□□□□□ -0.19
NR1H2P55055 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.9□□□□□ -0.19
NR1H2P55055 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.9□□□□□ -0.19
NR1H2P55055 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NR1H2P55055 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NR1H2P55055 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.9□□□□□ -0.19
NR1H2P55055 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
NR1H2P55055 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR1H2P55055 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.89□□□□□ -0.19
NR1H2P55055 PCDHA5-203ENST00000614258 4248 ntBASIC13.89□□□□□ -0.19
NR1H2P55055 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms