Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CDC34P49427 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 AL118506.1-201ENST00000601296 3082 ntBASIC11.57□□□□□ -0.56
CDC34P49427 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CDC34P49427 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
CDC34P49427 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.57□□□□□ -0.56
CDC34P49427 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.57□□□□□ -0.56
CDC34P49427 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CDC34P49427 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
CDC34P49427 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.57□□□□□ -0.56
CDC34P49427 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.57□□□□□ -0.56
CDC34P49427 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC11.57□□□□□ -0.56
CDC34P49427 RPL18-209ENST00000550645 463 ntTSL 5 BASIC11.57□□□□□ -0.56
CDC34P49427 RPL18-214ENST00000552588 559 ntTSL 3 BASIC11.57□□□□□ -0.56
CDC34P49427 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.57□□□□□ -0.56
CDC34P49427 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.57□□□□□ -0.56
CDC34P49427 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 AC140113.2-201ENST00000604370 208 ntBASIC11.57□□□□□ -0.56
CDC34P49427 AC027601.4-201ENST00000611259 610 ntBASIC11.57□□□□□ -0.56
CDC34P49427 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.57□□□□□ -0.56
CDC34P49427 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CDC34P49427 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.57□□□□□ -0.56
CDC34P49427 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CDC34P49427 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.57□□□□□ -0.56
CDC34P49427 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
CDC34P49427 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CDC34P49427 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.57□□□□□ -0.56
CDC34P49427 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
CDC34P49427 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CDC34P49427 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.57□□□□□ -0.56
CDC34P49427 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CDC34P49427 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CDC34P49427 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.56□□□□□ -0.56
CDC34P49427 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.56□□□□□ -0.56
CDC34P49427 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
CDC34P49427 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.56□□□□□ -0.56
CDC34P49427 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
CDC34P49427 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC34P49427 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CDC34P49427 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC34P49427 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CDC34P49427 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC34P49427 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.56□□□□□ -0.56
CDC34P49427 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
CDC34P49427 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.56□□□□□ -0.56
CDC34P49427 AC007969.1-201ENST00000433675 447 ntBASIC11.56□□□□□ -0.56
CDC34P49427 AL353779.1-201ENST00000434793 351 ntBASIC11.56□□□□□ -0.56
CDC34P49427 RBPMS2P1-201ENST00000437762 623 ntBASIC11.56□□□□□ -0.56
CDC34P49427 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC34P49427 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC34P49427 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CDC34P49427 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CDC34P49427 PP7080-204ENST00000510714 601 ntTSL 3 BASIC11.56□□□□□ -0.56
CDC34P49427 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
CDC34P49427 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC11.56□□□□□ -0.56
CDC34P49427 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CDC34P49427 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms