Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.19■□□□□ 0.02
MTHFRP42898 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.19■□□□□ 0.02
MTHFRP42898 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MTHFRP42898 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.19■□□□□ 0.02
MTHFRP42898 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
MTHFRP42898 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
MTHFRP42898 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MTHFRP42898 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 AC106881.1-201ENST00000605849 3329 ntBASIC15.19■□□□□ 0.02
MTHFRP42898 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.18■□□□□ 0.02
MTHFRP42898 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.18■□□□□ 0.02
MTHFRP42898 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
MTHFRP42898 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.18■□□□□ 0.02
MTHFRP42898 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MTHFRP42898 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MTHFRP42898 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.18■□□□□ 0.02
MTHFRP42898 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
MTHFRP42898 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.18■□□□□ 0.02
MTHFRP42898 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MTHFRP42898 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MTHFRP42898 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MTHFRP42898 GUSBP10-201ENST00000417412 665 ntBASIC15.18■□□□□ 0.02
MTHFRP42898 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC15.18■□□□□ 0.02
MTHFRP42898 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.18■□□□□ 0.02
MTHFRP42898 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC15.18■□□□□ 0.02
MTHFRP42898 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MTHFRP42898 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.18■□□□□ 0.02
MTHFRP42898 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MTHFRP42898 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.18■□□□□ 0.02
MTHFRP42898 KRT8P1-201ENST00000557533 1207 ntBASIC15.18■□□□□ 0.02
MTHFRP42898 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MTHFRP42898 HERC2P11-201ENST00000562845 725 ntBASIC15.18■□□□□ 0.02
MTHFRP42898 AC100756.2-201ENST00000569537 736 ntBASIC15.18■□□□□ 0.02
MTHFRP42898 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.18■□□□□ 0.02
MTHFRP42898 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MTHFRP42898 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
MTHFRP42898 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MTHFRP42898 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.18■□□□□ 0.02
MTHFRP42898 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.18■□□□□ 0.02
MTHFRP42898 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MTHFRP42898 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.18■□□□□ 0.02
MTHFRP42898 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MTHFRP42898 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MTHFRP42898 IL9RP3-201ENST00000442856 1674 ntBASIC15.18■□□□□ 0.02
MTHFRP42898 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MTHFRP42898 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MTHFRP42898 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MTHFRP42898 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
MTHFRP42898 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MTHFRP42898 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
MTHFRP42898 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.18■□□□□ 0.02
MTHFRP42898 MRPL37P1-201ENST00000592451 1337 ntBASIC15.17■□□□□ 0.02
MTHFRP42898 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MTHFRP42898 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
MTHFRP42898 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.17■□□□□ 0.02
MTHFRP42898 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.17■□□□□ 0.02
MTHFRP42898 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
MTHFRP42898 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.17■□□□□ 0.02
MTHFRP42898 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
MTHFRP42898 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
MTHFRP42898 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.17■□□□□ 0.02
MTHFRP42898 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.17■□□□□ 0.02
MTHFRP42898 GCSHP3-201ENST00000431120 391 ntBASIC15.17■□□□□ 0.02
MTHFRP42898 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MTHFRP42898 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.17■□□□□ 0.02
MTHFRP42898 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.17■□□□□ 0.02
MTHFRP42898 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.17■□□□□ 0.02
MTHFRP42898 RNA5SP417-201ENST00000516459 108 ntBASIC15.17■□□□□ 0.02
MTHFRP42898 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC15.17■□□□□ 0.02
MTHFRP42898 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.17■□□□□ 0.02
MTHFRP42898 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.17■□□□□ 0.02
MTHFRP42898 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.17■□□□□ 0.02
MTHFRP42898 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MTHFRP42898 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms