Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 MIR326-201ENST00000362220 95 ntBASIC11.95□□□□□ -0.5
CEACAM3P40198 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 AK6-201ENST00000380818 1183 ntTSL 2 BASIC11.95□□□□□ -0.5
CEACAM3P40198 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC11.95□□□□□ -0.5
CEACAM3P40198 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC11.95□□□□□ -0.5
CEACAM3P40198 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
CEACAM3P40198 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CEACAM3P40198 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
CEACAM3P40198 AC103988.2-201ENST00000561804 725 ntBASIC11.95□□□□□ -0.5
CEACAM3P40198 AC100827.2-201ENST00000563214 1194 ntBASIC11.95□□□□□ -0.5
CEACAM3P40198 DUX4L46-201ENST00000566845 751 ntBASIC11.95□□□□□ -0.5
CEACAM3P40198 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.95□□□□□ -0.5
CEACAM3P40198 CYGB-203ENST00000589145 788 ntTSL 3 BASIC11.95□□□□□ -0.5
CEACAM3P40198 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
CEACAM3P40198 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC11.95□□□□□ -0.5
CEACAM3P40198 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC11.95□□□□□ -0.5
CEACAM3P40198 AC009884.2-201ENST00000603110 324 ntBASIC11.95□□□□□ -0.5
CEACAM3P40198 AL008721.1-201ENST00000609964 604 ntBASIC11.95□□□□□ -0.5
CEACAM3P40198 AP001002.3-201ENST00000623482 206 ntBASIC11.95□□□□□ -0.5
CEACAM3P40198 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC11.95□□□□□ -0.5
CEACAM3P40198 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.95□□□□□ -0.5
CEACAM3P40198 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.95□□□□□ -0.5
CEACAM3P40198 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CEACAM3P40198 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.95□□□□□ -0.5
CEACAM3P40198 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CEACAM3P40198 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CEACAM3P40198 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC11.95□□□□□ -0.5
CEACAM3P40198 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC11.95□□□□□ -0.5
CEACAM3P40198 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
CEACAM3P40198 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
CEACAM3P40198 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CEACAM3P40198 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CEACAM3P40198 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CEACAM3P40198 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
CEACAM3P40198 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CEACAM3P40198 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
CEACAM3P40198 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC11.94□□□□□ -0.5
CEACAM3P40198 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.94□□□□□ -0.5
CEACAM3P40198 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 AC118758.2-201ENST00000614242 2813 ntBASIC11.94□□□□□ -0.5
CEACAM3P40198 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 TUBB1P2-201ENST00000422712 1306 ntBASIC11.94□□□□□ -0.5
CEACAM3P40198 TUBB1P1-201ENST00000503144 1300 ntBASIC11.94□□□□□ -0.5
CEACAM3P40198 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.94□□□□□ -0.5
CEACAM3P40198 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CEACAM3P40198 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC11.94□□□□□ -0.5
CEACAM3P40198 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.94□□□□□ -0.5
CEACAM3P40198 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
CEACAM3P40198 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.94□□□□□ -0.5
CEACAM3P40198 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.94□□□□□ -0.5
CEACAM3P40198 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.94□□□□□ -0.5
CEACAM3P40198 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.94□□□□□ -0.5
CEACAM3P40198 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.94□□□□□ -0.5
CEACAM3P40198 TISP43-201ENST00000409793 538 ntTSL 4 BASIC11.94□□□□□ -0.5
CEACAM3P40198 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.94□□□□□ -0.5
CEACAM3P40198 RPS2P32-201ENST00000439199 892 ntBASIC11.94□□□□□ -0.5
CEACAM3P40198 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC11.94□□□□□ -0.5
CEACAM3P40198 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC11.94□□□□□ -0.5
CEACAM3P40198 MYADML-201ENST00000474610 2147 ntBASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms