Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC092580.1-201ENST00000433998 658 ntBASIC14.28□□□□□ -0.12
TRIM23P36406 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.28□□□□□ -0.12
TRIM23P36406 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRIM23P36406 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM23P36406 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM23P36406 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM23P36406 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
TRIM23P36406 AL133499.1-201ENST00000596207 608 ntBASIC14.28□□□□□ -0.12
TRIM23P36406 AC012044.1-201ENST00000603431 297 ntBASIC14.28□□□□□ -0.12
TRIM23P36406 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.28□□□□□ -0.12
TRIM23P36406 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
TRIM23P36406 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.28□□□□□ -0.12
TRIM23P36406 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRIM23P36406 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM23P36406 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRIM23P36406 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM23P36406 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
TRIM23P36406 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.28□□□□□ -0.12
TRIM23P36406 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.28□□□□□ -0.12
TRIM23P36406 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM23P36406 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.27□□□□□ -0.12
TRIM23P36406 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM23P36406 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.27□□□□□ -0.12
TRIM23P36406 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM23P36406 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM23P36406 AC007686.3-201ENST00000619017 3487 ntBASIC14.27□□□□□ -0.12
TRIM23P36406 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM23P36406 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRIM23P36406 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRIM23P36406 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.27□□□□□ -0.12
TRIM23P36406 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM23P36406 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM23P36406 RNA5SP359-201ENST00000364838 113 ntBASIC14.27□□□□□ -0.13
TRIM23P36406 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
TRIM23P36406 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM23P36406 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM23P36406 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM23P36406 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM23P36406 AC026320.2-201ENST00000434379 478 ntBASIC14.27□□□□□ -0.13
TRIM23P36406 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.27□□□□□ -0.13
TRIM23P36406 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TRIM23P36406 MAGEA5-201ENST00000446757 942 ntBASIC14.27□□□□□ -0.13
TRIM23P36406 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM23P36406 AC234782.1-201ENST00000451950 919 ntBASIC14.27□□□□□ -0.13
TRIM23P36406 RN7SL530P-201ENST00000485097 298 ntBASIC14.27□□□□□ -0.13
TRIM23P36406 AC008723.1-201ENST00000506922 207 ntBASIC14.27□□□□□ -0.13
TRIM23P36406 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM23P36406 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.27□□□□□ -0.13
TRIM23P36406 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM23P36406 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.27□□□□□ -0.13
TRIM23P36406 AL022334.2-201ENST00000610000 484 ntBASIC14.27□□□□□ -0.13
TRIM23P36406 LINC01783-202ENST00000614408 828 ntBASIC14.27□□□□□ -0.13
TRIM23P36406 BX284668.2-205ENST00000619677 828 ntBASIC14.27□□□□□ -0.13
TRIM23P36406 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM23P36406 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM23P36406 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM23P36406 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
TRIM23P36406 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM23P36406 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM23P36406 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.27□□□□□ -0.13
TRIM23P36406 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
TRIM23P36406 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM23P36406 AC090505.1-201ENST00000430515 1834 ntBASIC14.27□□□□□ -0.13
TRIM23P36406 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.27□□□□□ -0.13
TRIM23P36406 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM23P36406 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRIM23P36406 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM23P36406 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM23P36406 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM23P36406 FAM90A2P-201ENST00000511144 1395 ntBASIC14.26□□□□□ -0.13
TRIM23P36406 FAM90A25P-201ENST00000528404 1395 ntBASIC14.26□□□□□ -0.13
TRIM23P36406 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM23P36406 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM23P36406 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM23P36406 AC026748.1-201ENST00000624349 3251 ntBASIC14.26□□□□□ -0.13
TRIM23P36406 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRIM23P36406 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM23P36406 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.26□□□□□ -0.13
TRIM23P36406 CEP164P1-201ENST00000455142 418 ntBASIC14.26□□□□□ -0.13
TRIM23P36406 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.26□□□□□ -0.13
TRIM23P36406 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRIM23P36406 AC079328.1-201ENST00000560358 952 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms