Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
ABCD3P28288 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.43□□□□□ -0.26
ABCD3P28288 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.43□□□□□ -0.26
ABCD3P28288 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.43□□□□□ -0.26
ABCD3P28288 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ABCD3P28288 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ABCD3P28288 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.42□□□□□ -0.26
ABCD3P28288 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ABCD3P28288 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
ABCD3P28288 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.42□□□□□ -0.26
ABCD3P28288 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 AL359183.1-201ENST00000623796 2132 ntBASIC13.42□□□□□ -0.26
ABCD3P28288 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ABCD3P28288 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
ABCD3P28288 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ABCD3P28288 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
ABCD3P28288 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.42□□□□□ -0.26
ABCD3P28288 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.42□□□□□ -0.26
ABCD3P28288 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.42□□□□□ -0.26
ABCD3P28288 NKAIN1P1-201ENST00000435754 582 ntBASIC13.42□□□□□ -0.26
ABCD3P28288 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.42□□□□□ -0.26
ABCD3P28288 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.42□□□□□ -0.26
ABCD3P28288 AC013355.1-201ENST00000562625 723 ntBASIC13.42□□□□□ -0.26
ABCD3P28288 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.42□□□□□ -0.26
ABCD3P28288 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.42□□□□□ -0.26
ABCD3P28288 AL451050.2-201ENST00000606967 682 ntBASIC13.42□□□□□ -0.26
ABCD3P28288 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.42□□□□□ -0.26
ABCD3P28288 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
ABCD3P28288 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.42□□□□□ -0.26
ABCD3P28288 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ABCD3P28288 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.42□□□□□ -0.26
ABCD3P28288 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
ABCD3P28288 FAM90A7P-201ENST00000382628 1395 ntBASIC13.42□□□□□ -0.26
ABCD3P28288 FAM90A23P-201ENST00000400136 1395 ntBASIC13.42□□□□□ -0.26
ABCD3P28288 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.42□□□□□ -0.26
ABCD3P28288 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ABCD3P28288 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.42□□□□□ -0.26
ABCD3P28288 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.42□□□□□ -0.26
ABCD3P28288 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ABCD3P28288 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.41□□□□□ -0.26
ABCD3P28288 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCD3P28288 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ABCD3P28288 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ABCD3P28288 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.41□□□□□ -0.26
ABCD3P28288 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.41□□□□□ -0.26
ABCD3P28288 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
ABCD3P28288 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
ABCD3P28288 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
ABCD3P28288 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.41□□□□□ -0.26
ABCD3P28288 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCD3P28288 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.41□□□□□ -0.26
ABCD3P28288 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ABCD3P28288 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ABCD3P28288 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.41□□□□□ -0.26
ABCD3P28288 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.41□□□□□ -0.26
ABCD3P28288 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 AL161932.2-201ENST00000435436 679 ntBASIC13.41□□□□□ -0.26
ABCD3P28288 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ABCD3P28288 AC091804.1-201ENST00000486888 567 ntBASIC13.41□□□□□ -0.26
ABCD3P28288 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.41□□□□□ -0.26
ABCD3P28288 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.41□□□□□ -0.26
ABCD3P28288 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.41□□□□□ -0.26
ABCD3P28288 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.41□□□□□ -0.26
ABCD3P28288 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms