Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.01□□□□□ -0.17
PTX3P26022 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.01□□□□□ -0.17
PTX3P26022 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14□□□□□ -0.17
PTX3P26022 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PTX3P26022 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14□□□□□ -0.17
PTX3P26022 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14□□□□□ -0.17
PTX3P26022 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PTX3P26022 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
PTX3P26022 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PTX3P26022 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
PTX3P26022 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PTX3P26022 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
PTX3P26022 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14□□□□□ -0.17
PTX3P26022 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14□□□□□ -0.17
PTX3P26022 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14□□□□□ -0.17
PTX3P26022 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14□□□□□ -0.17
PTX3P26022 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
PTX3P26022 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14□□□□□ -0.17
PTX3P26022 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14□□□□□ -0.17
PTX3P26022 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14□□□□□ -0.17
PTX3P26022 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14□□□□□ -0.17
PTX3P26022 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14□□□□□ -0.17
PTX3P26022 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14□□□□□ -0.17
PTX3P26022 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14□□□□□ -0.17
PTX3P26022 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
PTX3P26022 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14□□□□□ -0.17
PTX3P26022 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PTX3P26022 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14□□□□□ -0.17
PTX3P26022 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PTX3P26022 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PTX3P26022 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.99□□□□□ -0.17
PTX3P26022 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PTX3P26022 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 AC064801.2-201ENST00000625052 1303 ntBASIC13.99□□□□□ -0.17
PTX3P26022 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.99□□□□□ -0.17
PTX3P26022 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.99□□□□□ -0.17
PTX3P26022 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.99□□□□□ -0.17
PTX3P26022 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.99□□□□□ -0.17
PTX3P26022 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.99□□□□□ -0.17
PTX3P26022 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.99□□□□□ -0.17
PTX3P26022 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.99□□□□□ -0.17
PTX3P26022 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.99□□□□□ -0.17
PTX3P26022 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.99□□□□□ -0.17
PTX3P26022 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.99□□□□□ -0.17
PTX3P26022 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
PTX3P26022 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.99□□□□□ -0.17
PTX3P26022 AP006547.1-201ENST00000563435 692 ntBASIC13.99□□□□□ -0.17
PTX3P26022 DUX4L46-201ENST00000566845 751 ntBASIC13.99□□□□□ -0.17
PTX3P26022 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.99□□□□□ -0.17
PTX3P26022 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.99□□□□□ -0.17
PTX3P26022 AL035252.4-201ENST00000624174 288 ntBASIC13.99□□□□□ -0.17
PTX3P26022 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.99□□□□□ -0.17
PTX3P26022 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PTX3P26022 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PTX3P26022 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTX3P26022 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms