Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.4□□□□□ -0.42
VAMP1P23763 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
VAMP1P23763 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
VAMP1P23763 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.4□□□□□ -0.42
VAMP1P23763 MRPL3P1-201ENST00000400109 1033 ntBASIC12.4□□□□□ -0.42
VAMP1P23763 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.4□□□□□ -0.42
VAMP1P23763 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
VAMP1P23763 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.4□□□□□ -0.42
VAMP1P23763 SERBP1P3-201ENST00000459980 809 ntBASIC12.4□□□□□ -0.42
VAMP1P23763 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.4□□□□□ -0.42
VAMP1P23763 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.4□□□□□ -0.42
VAMP1P23763 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.4□□□□□ -0.42
VAMP1P23763 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
VAMP1P23763 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
VAMP1P23763 AL133215.2-201ENST00000609242 977 ntBASIC12.4□□□□□ -0.42
VAMP1P23763 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.4□□□□□ -0.42
VAMP1P23763 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.4□□□□□ -0.42
VAMP1P23763 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.4□□□□□ -0.42
VAMP1P23763 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VAMP1P23763 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.4□□□□□ -0.42
VAMP1P23763 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.4□□□□□ -0.42
VAMP1P23763 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
VAMP1P23763 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.4□□□□□ -0.43
VAMP1P23763 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
VAMP1P23763 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
VAMP1P23763 AC011481.3-201ENST00000623895 5594 ntBASIC12.4□□□□□ -0.43
VAMP1P23763 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
VAMP1P23763 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
VAMP1P23763 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.39□□□□□ -0.43
VAMP1P23763 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.39□□□□□ -0.43
VAMP1P23763 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
VAMP1P23763 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.39□□□□□ -0.43
VAMP1P23763 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.39□□□□□ -0.43
VAMP1P23763 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
VAMP1P23763 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
VAMP1P23763 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
VAMP1P23763 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
VAMP1P23763 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
VAMP1P23763 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.39□□□□□ -0.43
VAMP1P23763 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.39□□□□□ -0.43
VAMP1P23763 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.39□□□□□ -0.43
VAMP1P23763 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
VAMP1P23763 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.39□□□□□ -0.43
VAMP1P23763 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.39□□□□□ -0.43
VAMP1P23763 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 RPL13P2-201ENST00000440687 659 ntBASIC12.39□□□□□ -0.43
VAMP1P23763 RNA5SP419-201ENST00000515908 135 ntBASIC12.39□□□□□ -0.43
VAMP1P23763 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.39□□□□□ -0.43
VAMP1P23763 AC025048.3-201ENST00000590609 569 ntBASIC12.39□□□□□ -0.43
VAMP1P23763 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.39□□□□□ -0.43
VAMP1P23763 AC005702.4-201ENST00000618393 416 ntBASIC12.39□□□□□ -0.43
VAMP1P23763 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.39□□□□□ -0.43
VAMP1P23763 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.39□□□□□ -0.43
VAMP1P23763 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.39□□□□□ -0.43
VAMP1P23763 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.39□□□□□ -0.43
VAMP1P23763 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.39□□□□□ -0.43
VAMP1P23763 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.39□□□□□ -0.43
VAMP1P23763 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 PCAT18-201ENST00000579458 2598 ntTSL 2 BASIC12.39□□□□□ -0.43
VAMP1P23763 AL035456.1-201ENST00000456064 1369 ntBASIC12.39□□□□□ -0.43
VAMP1P23763 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.39□□□□□ -0.43
VAMP1P23763 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.39□□□□□ -0.43
VAMP1P23763 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 FAM106A-201ENST00000392176 2281 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
VAMP1P23763 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.39□□□□□ -0.43
VAMP1P23763 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.39□□□□□ -0.43
VAMP1P23763 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VAMP1P23763 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
VAMP1P23763 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.38□□□□□ -0.43
VAMP1P23763 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms