Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.72□□□□□ -0.05
XPAP23025 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.72□□□□□ -0.05
XPAP23025 AL008707.1-201ENST00000422498 534 ntBASIC14.72□□□□□ -0.05
XPAP23025 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.72□□□□□ -0.05
XPAP23025 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
XPAP23025 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.72□□□□□ -0.05
XPAP23025 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.72□□□□□ -0.05
XPAP23025 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
XPAP23025 NDUFV2P1-201ENST00000596415 907 ntBASIC14.72□□□□□ -0.05
XPAP23025 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
XPAP23025 AC068587.8-201ENST00000641239 219 ntBASIC14.72□□□□□ -0.05
XPAP23025 Z98259.2-201ENST00000641583 609 ntBASIC14.72□□□□□ -0.05
XPAP23025 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC14.72□□□□□ -0.05
XPAP23025 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
XPAP23025 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.72□□□□□ -0.05
XPAP23025 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.72□□□□□ -0.05
XPAP23025 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.72□□□□□ -0.05
XPAP23025 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
XPAP23025 AL590440.2-201ENST00000641973 1595 ntBASIC14.72□□□□□ -0.05
XPAP23025 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
XPAP23025 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
XPAP23025 AC006504.5-208ENST00000588784 2401 ntBASIC14.72□□□□□ -0.05
XPAP23025 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.72□□□□□ -0.05
XPAP23025 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.72□□□□□ -0.05
XPAP23025 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
XPAP23025 KRT8P28-201ENST00000433288 1390 ntBASIC14.72□□□□□ -0.05
XPAP23025 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
XPAP23025 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.71□□□□□ -0.05
XPAP23025 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.71□□□□□ -0.05
XPAP23025 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.71□□□□□ -0.05
XPAP23025 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
XPAP23025 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.71□□□□□ -0.05
XPAP23025 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.71□□□□□ -0.05
XPAP23025 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.71□□□□□ -0.05
XPAP23025 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
XPAP23025 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.71□□□□□ -0.05
XPAP23025 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
XPAP23025 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.71□□□□□ -0.05
XPAP23025 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 MIR769-201ENST00000390225 118 ntBASIC14.71□□□□□ -0.05
XPAP23025 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 CALR4P-201ENST00000431943 946 ntBASIC14.71□□□□□ -0.05
XPAP23025 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.71□□□□□ -0.05
XPAP23025 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 AC022447.6-201ENST00000515522 438 ntBASIC14.71□□□□□ -0.05
XPAP23025 SCARNA21-201ENST00000517026 139 ntBASIC14.71□□□□□ -0.05
XPAP23025 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.71□□□□□ -0.05
XPAP23025 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
XPAP23025 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.71□□□□□ -0.05
XPAP23025 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.71□□□□□ -0.05
XPAP23025 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.71□□□□□ -0.05
XPAP23025 AC133540.1-201ENST00000620845 1019 ntBASIC14.71□□□□□ -0.05
XPAP23025 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
XPAP23025 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.71□□□□□ -0.05
XPAP23025 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
XPAP23025 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.71□□□□□ -0.06
XPAP23025 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
XPAP23025 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
XPAP23025 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
XPAP23025 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
XPAP23025 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
XPAP23025 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
XPAP23025 AL354702.1-201ENST00000442006 1960 ntBASIC14.71□□□□□ -0.06
XPAP23025 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
XPAP23025 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
XPAP23025 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.71□□□□□ -0.06
XPAP23025 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
XPAP23025 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
XPAP23025 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
XPAP23025 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
XPAP23025 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
XPAP23025 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
XPAP23025 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.7□□□□□ -0.06
XPAP23025 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
XPAP23025 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
XPAP23025 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
XPAP23025 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.7□□□□□ -0.06
XPAP23025 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
XPAP23025 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.7□□□□□ -0.06
XPAP23025 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
XPAP23025 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
XPAP23025 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms