Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CFTRP13569 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CFTRP13569 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
CFTRP13569 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CFTRP13569 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CFTRP13569 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CFTRP13569 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CFTRP13569 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CFTRP13569 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CFTRP13569 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CFTRP13569 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CFTRP13569 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC23.91■■□□□ 1.42
CFTRP13569 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CFTRP13569 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC23.91■■□□□ 1.42
CFTRP13569 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC23.91■■□□□ 1.42
CFTRP13569 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC23.91■■□□□ 1.42
CFTRP13569 ABCC6P1-203ENST00000565566 1170 ntBASIC23.91■■□□□ 1.42
CFTRP13569 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC23.91■■□□□ 1.42
CFTRP13569 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC23.91■■□□□ 1.42
CFTRP13569 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC23.91■■□□□ 1.42
CFTRP13569 RPS5-205ENST00000598495 800 ntTSL 3 BASIC23.91■■□□□ 1.42
CFTRP13569 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC23.91■■□□□ 1.42
CFTRP13569 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC23.91■■□□□ 1.42
CFTRP13569 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CFTRP13569 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
CFTRP13569 KRT8P38-201ENST00000441370 1430 ntBASIC23.91■■□□□ 1.42
CFTRP13569 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CFTRP13569 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CFTRP13569 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC23.91■■□□□ 1.42
CFTRP13569 RN7SL832P-201ENST00000607781 1756 ntBASIC23.91■■□□□ 1.42
CFTRP13569 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CFTRP13569 LINC00554-201ENST00000564841 3011 ntBASIC23.9■■□□□ 1.42
CFTRP13569 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
CFTRP13569 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFTRP13569 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CFTRP13569 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
CFTRP13569 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CFTRP13569 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFTRP13569 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFTRP13569 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFTRP13569 HSD3BP1-201ENST00000286193 1111 ntBASIC23.9■■□□□ 1.42
CFTRP13569 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFTRP13569 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
CFTRP13569 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
CFTRP13569 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CFTRP13569 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC23.9■■□□□ 1.42
CFTRP13569 AC053503.3-201ENST00000448375 114 ntBASIC23.9■■□□□ 1.42
CFTRP13569 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC23.9■■□□□ 1.42
CFTRP13569 POLL-206ENST00000370172 2308 ntTSL 2 BASIC23.9■■□□□ 1.42
CFTRP13569 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC23.9■■□□□ 1.42
CFTRP13569 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CFTRP13569 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC23.9■■□□□ 1.42
CFTRP13569 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC23.9■■□□□ 1.42
CFTRP13569 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFTRP13569 PTN-202ENST00000393083 1599 ntTSL 5 BASIC23.9■■□□□ 1.42
CFTRP13569 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFTRP13569 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFTRP13569 STK16-202ENST00000409260 1493 ntTSL 5 BASIC23.9■■□□□ 1.42
CFTRP13569 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
CFTRP13569 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CFTRP13569 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CFTRP13569 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CFTRP13569 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
CFTRP13569 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC23.89■■□□□ 1.42
CFTRP13569 TPT1P11-201ENST00000458482 498 ntBASIC23.89■■□□□ 1.42
CFTRP13569 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC23.89■■□□□ 1.42
CFTRP13569 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CFTRP13569 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CFTRP13569 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CFTRP13569 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CFTRP13569 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC23.89■■□□□ 1.42
CFTRP13569 AC087072.1-201ENST00000603727 421 ntBASIC23.89■■□□□ 1.42
CFTRP13569 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
CFTRP13569 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC23.89■■□□□ 1.42
CFTRP13569 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
CFTRP13569 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CFTRP13569 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CFTRP13569 AC007950.2-201ENST00000615045 2347 ntBASIC23.89■■□□□ 1.42
CFTRP13569 CICP6-201ENST00000457191 2729 ntBASIC23.89■■□□□ 1.42
CFTRP13569 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
CFTRP13569 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC23.89■■□□□ 1.41
CFTRP13569 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
CFTRP13569 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CFTRP13569 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CFTRP13569 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CFTRP13569 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CFTRP13569 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CFTRP13569 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CFTRP13569 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CFTRP13569 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CFTRP13569 DNM1P46-202ENST00000415963 882 ntBASIC23.88■■□□□ 1.41
CFTRP13569 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC23.88■■□□□ 1.41
CFTRP13569 AC023051.2-201ENST00000541141 460 ntBASIC23.88■■□□□ 1.41
CFTRP13569 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC23.88■■□□□ 1.41
CFTRP13569 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC23.88■■□□□ 1.41
CFTRP13569 CLPP-205ENST00000596605 646 ntTSL 2 BASIC23.88■■□□□ 1.41
CFTRP13569 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC23.88■■□□□ 1.41
CFTRP13569 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CFTRP13569 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC23.88■■□□□ 1.41
CFTRP13569 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms