Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CCL4P13236 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL4P13236 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL4P13236 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.6□□□□□ -0.23
CCL4P13236 AL157792.1-201ENST00000488281 530 ntBASIC13.6□□□□□ -0.23
CCL4P13236 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC13.6□□□□□ -0.23
CCL4P13236 AC084752.1-201ENST00000509766 622 ntBASIC13.6□□□□□ -0.23
CCL4P13236 ALG1L6P-201ENST00000515248 758 ntBASIC13.6□□□□□ -0.23
CCL4P13236 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL4P13236 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CCL4P13236 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CCL4P13236 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.6□□□□□ -0.23
CCL4P13236 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 AC007250.1-201ENST00000608934 338 ntBASIC13.6□□□□□ -0.23
CCL4P13236 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
CCL4P13236 AC067931.2-201ENST00000623655 2003 ntBASIC13.6□□□□□ -0.23
CCL4P13236 LINC00431-202ENST00000636375 159 ntBASIC13.6□□□□□ -0.23
CCL4P13236 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
CCL4P13236 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL4P13236 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL4P13236 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL4P13236 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL4P13236 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CCL4P13236 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
CCL4P13236 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL4P13236 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
CCL4P13236 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL4P13236 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CCL4P13236 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
CCL4P13236 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.59□□□□□ -0.23
CCL4P13236 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.59□□□□□ -0.23
CCL4P13236 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CCL4P13236 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL4P13236 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 PYY2-201ENST00000315776 282 ntBASIC13.59□□□□□ -0.23
CCL4P13236 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CCL4P13236 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.59□□□□□ -0.23
CCL4P13236 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CCL4P13236 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC13.59□□□□□ -0.23
CCL4P13236 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.59□□□□□ -0.23
CCL4P13236 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 AC018638.5-201ENST00000450885 754 ntBASIC13.59□□□□□ -0.23
CCL4P13236 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.59□□□□□ -0.23
CCL4P13236 LINC00634-202ENST00000505157 222 ntBASIC13.59□□□□□ -0.23
CCL4P13236 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL4P13236 AC095040.1-201ENST00000513286 675 ntBASIC13.59□□□□□ -0.23
CCL4P13236 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CCL4P13236 AC068867.1-201ENST00000559855 150 ntBASIC13.59□□□□□ -0.23
CCL4P13236 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC13.59□□□□□ -0.23
CCL4P13236 AL133467.4-201ENST00000602953 725 ntBASIC13.59□□□□□ -0.23
CCL4P13236 AL021707.6-201ENST00000609212 491 ntBASIC13.59□□□□□ -0.23
CCL4P13236 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
CCL4P13236 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CCL4P13236 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL4P13236 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.59□□□□□ -0.23
CCL4P13236 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CCL4P13236 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CCL4P13236 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL4P13236 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CCL4P13236 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms