Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLUP10909 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.2□□□□□ -0.3
CLUP10909 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLUP10909 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLUP10909 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLUP10909 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CLUP10909 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.2□□□□□ -0.3
CLUP10909 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLUP10909 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 DFFBP1-201ENST00000433250 979 ntBASIC13.2□□□□□ -0.3
CLUP10909 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.2□□□□□ -0.3
CLUP10909 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 RFPL4AP1-201ENST00000530883 850 ntBASIC13.2□□□□□ -0.3
CLUP10909 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.2□□□□□ -0.3
CLUP10909 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.2□□□□□ -0.3
CLUP10909 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.2□□□□□ -0.3
CLUP10909 TMEM261P1-201ENST00000604899 340 ntBASIC13.2□□□□□ -0.3
CLUP10909 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.2□□□□□ -0.3
CLUP10909 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CLUP10909 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CLUP10909 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC13.2□□□□□ -0.3
CLUP10909 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.2□□□□□ -0.3
CLUP10909 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.2□□□□□ -0.3
CLUP10909 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLUP10909 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.2□□□□□ -0.3
CLUP10909 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CLUP10909 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.2□□□□□ -0.3
CLUP10909 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.2□□□□□ -0.3
CLUP10909 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLUP10909 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
CLUP10909 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 MSTO2P-201ENST00000314835 1709 ntBASIC13.19□□□□□ -0.3
CLUP10909 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.19□□□□□ -0.3
CLUP10909 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CLUP10909 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.19□□□□□ -0.3
CLUP10909 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.19□□□□□ -0.3
CLUP10909 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 CLUHP2-201ENST00000426660 1303 ntBASIC13.19□□□□□ -0.3
CLUP10909 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLUP10909 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.19□□□□□ -0.3
CLUP10909 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
CLUP10909 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CLUP10909 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLUP10909 AC090643.2-201ENST00000623442 2029 ntBASIC13.19□□□□□ -0.3
CLUP10909 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.19□□□□□ -0.3
CLUP10909 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.19□□□□□ -0.3
CLUP10909 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CLUP10909 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.19□□□□□ -0.3
CLUP10909 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.19□□□□□ -0.3
CLUP10909 TMEM198B-204ENST00000484016 896 ntBASIC13.19□□□□□ -0.3
CLUP10909 ELK1P1-201ENST00000485699 580 ntBASIC13.19□□□□□ -0.3
CLUP10909 INGX-202ENST00000489074 768 ntBASIC13.19□□□□□ -0.3
CLUP10909 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.19□□□□□ -0.3
CLUP10909 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.19□□□□□ -0.3
CLUP10909 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLUP10909 AC103988.2-201ENST00000561804 725 ntBASIC13.19□□□□□ -0.3
CLUP10909 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.19□□□□□ -0.3
CLUP10909 CTBP2P3-201ENST00000585629 1255 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms