Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
APOC3P02656 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
APOC3P02656 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
APOC3P02656 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
APOC3P02656 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.63□□□□□ -0.55
APOC3P02656 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 TUBB8P4-201ENST00000511806 1324 ntBASIC11.63□□□□□ -0.55
APOC3P02656 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
APOC3P02656 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC3P02656 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC11.63□□□□□ -0.55
APOC3P02656 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.63□□□□□ -0.55
APOC3P02656 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 BTBD11-202ENST00000357167 4107 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
APOC3P02656 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC3P02656 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC11.63□□□□□ -0.55
APOC3P02656 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 AL031432.4-201ENST00000641729 2190 ntBASIC11.63□□□□□ -0.55
APOC3P02656 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
APOC3P02656 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC3P02656 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC11.63□□□□□ -0.55
APOC3P02656 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC11.63□□□□□ -0.55
APOC3P02656 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
APOC3P02656 AC091607.1-201ENST00000490318 1060 ntBASIC11.63□□□□□ -0.55
APOC3P02656 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC3P02656 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC11.63□□□□□ -0.55
APOC3P02656 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC11.63□□□□□ -0.55
APOC3P02656 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.63□□□□□ -0.55
APOC3P02656 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC11.63□□□□□ -0.55
APOC3P02656 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC11.63□□□□□ -0.55
APOC3P02656 USB1-207ENST00000563149 1751 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC3P02656 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
APOC3P02656 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
APOC3P02656 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
APOC3P02656 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
APOC3P02656 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.63□□□□□ -0.55
APOC3P02656 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
APOC3P02656 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
APOC3P02656 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
APOC3P02656 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC11.63□□□□□ -0.55
APOC3P02656 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC11.63□□□□□ -0.55
APOC3P02656 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC3P02656 MSNP1-201ENST00000511640 1732 ntBASIC11.63□□□□□ -0.55
APOC3P02656 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC11.63□□□□□ -0.55
APOC3P02656 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
APOC3P02656 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC11.63□□□□□ -0.55
APOC3P02656 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
APOC3P02656 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC3P02656 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC3P02656 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC3P02656 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC3P02656 AL928654.5-201ENST00000624831 2501 ntBASIC11.62□□□□□ -0.55
APOC3P02656 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC3P02656 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC3P02656 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC11.62□□□□□ -0.55
APOC3P02656 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC3P02656 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.62□□□□□ -0.55
APOC3P02656 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
APOC3P02656 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC3P02656 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
APOC3P02656 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC3P02656 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
APOC3P02656 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC3P02656 LINC01165-201ENST00000445190 1623 ntBASIC11.62□□□□□ -0.55
APOC3P02656 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC3P02656 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
APOC3P02656 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
APOC3P02656 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
APOC3P02656 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC3P02656 AC136604.1-201ENST00000418535 575 ntBASIC11.62□□□□□ -0.55
APOC3P02656 RPS8P6-201ENST00000426177 609 ntBASIC11.62□□□□□ -0.55
APOC3P02656 AC098590.1-201ENST00000468126 897 ntBASIC11.62□□□□□ -0.55
APOC3P02656 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
APOC3P02656 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC3P02656 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC11.62□□□□□ -0.55
APOC3P02656 ABR-204ENST00000543210 1049 ntTSL 2 BASIC11.62□□□□□ -0.55
APOC3P02656 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms