Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AL928921.2-201ENST00000641325 2442 ntBASIC15.62■□□□□ 0.09
HLA-DRAP01903 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 FAM86MP-201ENST00000340703 885 ntBASIC15.61■□□□□ 0.09
HLA-DRAP01903 DPM3-202ENST00000368399 517 ntBASIC15.61■□□□□ 0.09
HLA-DRAP01903 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 AC126915.1-201ENST00000522847 1038 ntBASIC15.61■□□□□ 0.09
HLA-DRAP01903 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 RN7SL163P-201ENST00000583100 276 ntBASIC15.61■□□□□ 0.09
HLA-DRAP01903 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 AL118558.3-201ENST00000607414 1079 ntBASIC15.61■□□□□ 0.09
HLA-DRAP01903 AC090164.2-201ENST00000611487 516 ntBASIC15.61■□□□□ 0.09
HLA-DRAP01903 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 AL022313.4-201ENST00000562756 2046 ntBASIC15.61■□□□□ 0.09
HLA-DRAP01903 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DRAP01903 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRAP01903 AC067750.1-201ENST00000608826 6545 ntBASIC15.6■□□□□ 0.09
HLA-DRAP01903 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 AC018629.1-201ENST00000623381 1736 ntBASIC15.6■□□□□ 0.09
HLA-DRAP01903 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 TCAM1P-207ENST00000485295 1537 ntBASIC15.6■□□□□ 0.09
HLA-DRAP01903 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 OR2R1P-201ENST00000441404 914 ntBASIC15.6■□□□□ 0.09
HLA-DRAP01903 AC244107.1-201ENST00000442033 332 ntBASIC15.6■□□□□ 0.09
HLA-DRAP01903 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 MIR4538-201ENST00000581377 78 ntBASIC15.6■□□□□ 0.09
HLA-DRAP01903 AC021016.3-201ENST00000608367 477 ntBASIC15.6■□□□□ 0.09
HLA-DRAP01903 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 TUBB8P4-201ENST00000511806 1324 ntBASIC15.6■□□□□ 0.09
HLA-DRAP01903 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRAP01903 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
HLA-DRAP01903 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms