Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AC135782.3-201ENST00000562782 2105 ntBASIC13.06□□□□□ -0.32
CDRT1O95170 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.05□□□□□ -0.32
CDRT1O95170 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.05□□□□□ -0.32
CDRT1O95170 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.05□□□□□ -0.32
CDRT1O95170 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
CDRT1O95170 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.05□□□□□ -0.32
CDRT1O95170 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CDRT1O95170 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.05□□□□□ -0.32
CDRT1O95170 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.05□□□□□ -0.32
CDRT1O95170 AP006288.1-201ENST00000446065 395 ntBASIC13.05□□□□□ -0.32
CDRT1O95170 AC125807.1-201ENST00000483097 614 ntBASIC13.05□□□□□ -0.32
CDRT1O95170 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.05□□□□□ -0.32
CDRT1O95170 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.05□□□□□ -0.32
CDRT1O95170 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CDRT1O95170 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.05□□□□□ -0.32
CDRT1O95170 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.05□□□□□ -0.32
CDRT1O95170 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CDRT1O95170 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CDRT1O95170 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CDRT1O95170 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
CDRT1O95170 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 KRT8P35-201ENST00000483942 1338 ntBASIC13.05□□□□□ -0.32
CDRT1O95170 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.05□□□□□ -0.32
CDRT1O95170 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.05□□□□□ -0.32
CDRT1O95170 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CDRT1O95170 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.05□□□□□ -0.32
CDRT1O95170 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.05□□□□□ -0.32
CDRT1O95170 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.05□□□□□ -0.32
CDRT1O95170 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDRT1O95170 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.05□□□□□ -0.32
CDRT1O95170 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.04□□□□□ -0.32
CDRT1O95170 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CDRT1O95170 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.04□□□□□ -0.32
CDRT1O95170 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CDRT1O95170 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CDRT1O95170 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.04□□□□□ -0.32
CDRT1O95170 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.04□□□□□ -0.32
CDRT1O95170 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.04□□□□□ -0.32
CDRT1O95170 CNN2P2-201ENST00000443536 909 ntBASIC13.04□□□□□ -0.32
CDRT1O95170 CNN2P3-201ENST00000450201 906 ntBASIC13.04□□□□□ -0.32
CDRT1O95170 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.04□□□□□ -0.32
CDRT1O95170 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CDRT1O95170 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.04□□□□□ -0.32
CDRT1O95170 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.04□□□□□ -0.32
CDRT1O95170 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
CDRT1O95170 AL136317.3-201ENST00000618497 906 ntBASIC13.04□□□□□ -0.32
CDRT1O95170 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CDRT1O95170 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDRT1O95170 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms