Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 AC000077.1-201ENST00000420012 953 ntBASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 AC087481.3-201ENST00000602886 1894 ntBASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TMEM88BA6NKF7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 AC092850.2-201ENST00000623821 2697 ntBASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 KRT18P33-201ENST00000398525 1043 ntBASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 AC023051.2-201ENST00000541141 460 ntBASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 AC091691.1-201ENST00000583587 1018 ntBASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 AC015912.3-201ENST00000619432 348 ntBASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TMEM88BA6NKF7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms