Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 UPF3AP3-201ENST00000420996 769 ntBASIC12.5□□□□□ -0.41
TMEM235A6NFC5 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 EIF3FP3-201ENST00000434851 1086 ntBASIC12.5□□□□□ -0.41
TMEM235A6NFC5 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 RARRES2P5-201ENST00000564013 466 ntBASIC12.5□□□□□ -0.41
TMEM235A6NFC5 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 AC007431.3-201ENST00000623221 587 ntBASIC12.5□□□□□ -0.41
TMEM235A6NFC5 AL590560.3-201ENST00000623350 461 ntBASIC12.5□□□□□ -0.41
TMEM235A6NFC5 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 LINC02486-201ENST00000604157 3000 ntBASIC12.5□□□□□ -0.41
TMEM235A6NFC5 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 RN7SL399P-201ENST00000471648 279 ntBASIC12.49□□□□□ -0.41
TMEM235A6NFC5 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 AP001582.1-201ENST00000525856 295 ntBASIC12.49□□□□□ -0.41
TMEM235A6NFC5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 SORD2P-201ENST00000558556 1069 ntBASIC12.49□□□□□ -0.41
TMEM235A6NFC5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 AL603764.1-201ENST00000636452 321 ntBASIC12.49□□□□□ -0.41
TMEM235A6NFC5 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.49□□□□□ -0.41
TMEM235A6NFC5 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms