Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 MED15P5-201ENST00000423150 992 ntBASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 KRT18P32-201ENST00000424695 1287 ntBASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 HLA-K-203ENST00000430151 1046 ntBASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 AL589739.1-201ENST00000607720 493 ntBASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ERGIC3Q9Y282 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 CSPG4P11-201ENST00000560634 4910 ntBASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 AL645937.2-201ENST00000396808 931 ntBASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 AC092364.2-202ENST00000597012 1073 ntBASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 CETN4P-206ENST00000642099 2168 ntBASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 HSPA8P5-201ENST00000456928 2069 ntBASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 AC024075.2-201ENST00000598112 1473 ntBASIC13.36□□□□□ -0.27
ERGIC3Q9Y282 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.35□□□□□ -0.27
ERGIC3Q9Y282 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms