Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 ELK2AP-201ENST00000392510 1007 ntBASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 IMP3P2-201ENST00000489760 475 ntBASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 DUX4L46-201ENST00000566845 751 ntBASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 AC026740.1-201ENST00000607068 791 ntBASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 AC015967.2-201ENST00000624092 234 ntBASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 AC006435.4-201ENST00000625037 234 ntBASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 AC100757.4-201ENST00000626934 759 ntBASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 AL356737.1-201ENST00000634391 234 ntBASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 DMBT1P1-203ENST00000636837 4628 ntBASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA1Q9UND3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 RN7SL720P-201ENST00000488178 304 ntBASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 CHMP4BP1-201ENST00000556017 588 ntBASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 RN7SL190P-201ENST00000582519 257 ntBASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 AC016629.1-201ENST00000596579 586 ntBASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 AC009955.4-201ENST00000597192 544 ntBASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 AL645939.5-201ENST00000606834 243 ntBASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 AL136295.7-201ENST00000619226 1200 ntBASIC13.48□□□□□ -0.25
NPIPA1Q9UND3 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms